RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 PRR20EP86478 221 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 PRR20CP86479 221 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 PRR20DP86480 221 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 PRR20BP86481 221 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 PRR20AP86496 221 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 C10orf113Q5VZT2 155 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 MIC13Q5XKP0 118 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 WFDC3Q8IUB2 231 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 SPATA25Q9BR10 227 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 SHANK2-AS3Q9BTD1 123 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 PARD6GQ9BYG4 376 aaPredicted RBP17.23■□□□□ 0.35
LSM7-202ENST00000585395 SLC25A39Q9BZJ4 359 aaPredicted RBP17.23■□□□□ 0.35
LSM7-202ENST00000585395 SLC25A22Q9H936 323 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 NRN1Q9NPD7 142 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 SLC39A9Q9NUM3 307 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 PXMP4Q9Y6I8 212 aa17.23■□□□□ 0.35
LSM7-202ENST00000585395 H3BRN7 92 aa17.22■□□□□ 0.35
LSM7-202ENST00000585395 RPL7P18124 248 aaKnown RBP17.22■□□□□ 0.35
LSM7-202ENST00000585395 MEOX2P50222 304 aa17.22■□□□□ 0.35
LSM7-202ENST00000585395 HAGHQ16775 308 aa17.22■□□□□ 0.35
LSM7-202ENST00000585395 DNAJC4Q9NNZ3 241 aa17.22■□□□□ 0.35
LSM7-202ENST00000585395 Q5BKY6 102 aa17.21■□□□□ 0.35
LSM7-202ENST00000585395 TM2D3Q9BRN9 247 aa17.21■□□□□ 0.35
LSM7-202ENST00000585395 SEPSECSQ9HD40 501 aaKnown RBP17.21■□□□□ 0.35
LSM7-202ENST00000585395 TNFSF18Q9UNG2 199 aa17.21■□□□□ 0.35
LSM7-202ENST00000585395 LINC00305Q7Z4B0 112 aa17.2■□□□□ 0.34
LSM7-202ENST00000585395 GATAD1Q8WUU5 269 aa17.2■□□□□ 0.34
LSM7-202ENST00000585395 KRTAP17-1Q9BYP8 105 aa17.2■□□□□ 0.34
LSM7-202ENST00000585395 K7EQG2 157 aa17.19■□□□□ 0.34
LSM7-202ENST00000585395 ID1P41134 155 aa17.19■□□□□ 0.34
LSM7-202ENST00000585395 SNRPD3P62318 126 aaKnown RBP17.19■□□□□ 0.34
LSM7-202ENST00000585395 BORCS7-ASMTA0A0B4J1R7 106 aa17.18■□□□□ 0.34
LSM7-202ENST00000585395 ATF4P18848 351 aaPredicted RBP17.18■□□□□ 0.34
LSM7-202ENST00000585395 UHRF2Q96PU4 802 aa17.18■□□□□ 0.34
LSM7-202ENST00000585395 SCRT1Q9BWW7 348 aa17.18■□□□□ 0.34
LSM7-202ENST00000585395 SLC25A32Q9H2D1 315 aa17.18■□□□□ 0.34
LSM7-202ENST00000585395 UBQLN2Q9UHD9 624 aa17.18■□□□□ 0.34
LSM7-202ENST00000585395 ARPC5O15511 151 aa17.17■□□□□ 0.34
LSM7-202ENST00000585395 PATE2Q6UY27 113 aa17.17■□□□□ 0.34
LSM7-202ENST00000585395 DCANP1Q8TF63 244 aa17.17■□□□□ 0.34
LSM7-202ENST00000585395 TAAR5O14804 337 aa17.16■□□□□ 0.34
LSM7-202ENST00000585395 ODF3L2Q3SX64 289 aa17.16■□□□□ 0.34
LSM7-202ENST00000585395 BPIFA4PQ86YQ2 179 aa17.16■□□□□ 0.34
LSM7-202ENST00000585395 TMEM37Q8WXS4 190 aa17.16■□□□□ 0.34
LSM7-202ENST00000585395 MFFQ9GZY8 342 aa17.16■□□□□ 0.34
LSM7-202ENST00000585395 MAP6D1Q9H9H5 199 aa17.16■□□□□ 0.34
LSM7-202ENST00000585395 TIMM9Q9Y5J7 89 aa17.16■□□□□ 0.34
LSM7-202ENST00000585395 HUWE1Q7Z6Z7 4374 aaKnown RBP17.15■□□□□ 0.34
LSM7-202ENST00000585395 RNF222A6NCQ9 220 aa17.15■□□□□ 0.34
LSM7-202ENST00000585395 RSG1Q9BU20 258 aa17.15■□□□□ 0.34
LSM7-202ENST00000585395 LOC102724200A0A096LPH7 203 aaPredicted RBP17.14■□□□□ 0.33
LSM7-202ENST00000585395 RBMY1BA6NDE4 496 aaKnown RBP17.14■□□□□ 0.33
LSM7-202ENST00000585395 RBMY1EA6NEQ0 496 aaKnown RBP17.14■□□□□ 0.33
LSM7-202ENST00000585395 HMSDA8MTL9 139 aa17.14■□□□□ 0.33
LSM7-202ENST00000585395 G3V3Q6 166 aa17.14■□□□□ 0.33
LSM7-202ENST00000585395 RBMY1DP0C7P1 496 aaKnown RBP17.14■□□□□ 0.33
LSM7-202ENST00000585395 LEMD1Q68G75 181 aa17.14■□□□□ 0.33
LSM7-202ENST00000585395 MRPL32Q9BYC8 188 aaKnown RBP17.14■□□□□ 0.33
LSM7-202ENST00000585395 WFDC1Q9HC57 220 aa17.14■□□□□ 0.33
LSM7-202ENST00000585395 ISLRO14498 428 aa17.13■□□□□ 0.33
LSM7-202ENST00000585395 ZNF688P0C7X2 276 aa17.13■□□□□ 0.33
LSM7-202ENST00000585395 PSMB3P49720 205 aa17.13■□□□□ 0.33
LSM7-202ENST00000585395 DEFB131AP59861 70 aa17.13■□□□□ 0.33
LSM7-202ENST00000585395 ZNF345Q14585 488 aa17.13■□□□□ 0.33
LSM7-202ENST00000585395 FFAR4Q5NUL3 377 aa17.13■□□□□ 0.33
LSM7-202ENST00000585395 C16orf92Q96LL3 132 aa17.13■□□□□ 0.33
LSM7-202ENST00000585395 hCG_2014768A0A024R1R8 64 aa17.12■□□□□ 0.33
LSM7-202ENST00000585395 SMLR1H3BR10 107 aa17.12■□□□□ 0.33
LSM7-202ENST00000585395 LRRC20Q8TCA0 184 aa17.12■□□□□ 0.33
LSM7-202ENST00000585395 GNPNAT1Q96EK6 184 aaPredicted RBP17.12■□□□□ 0.33
LSM7-202ENST00000585395 RETNQ9HD89 108 aa17.12■□□□□ 0.33
LSM7-202ENST00000585395 A0A0D9SG52 128 aa17.11■□□□□ 0.33
LSM7-202ENST00000585395 JTBO76095 146 aa17.11■□□□□ 0.33
LSM7-202ENST00000585395 CXCL2P19875 107 aa17.11■□□□□ 0.33
LSM7-202ENST00000585395 ACOT6Q3I5F7 207 aaPredicted RBP17.11■□□□□ 0.33
LSM7-202ENST00000585395 PSMG4Q5JS54 123 aa17.11■□□□□ 0.33
LSM7-202ENST00000585395 FAM78BQ5VT40 261 aa17.11■□□□□ 0.33
LSM7-202ENST00000585395 LINC00322Q6ZN03 302 aaPredicted RBP17.11■□□□□ 0.33
LSM7-202ENST00000585395 AKAP14Q86UN6 197 aa17.11■□□□□ 0.33
LSM7-202ENST00000585395 TCTE3Q8IZS6 198 aa17.11■□□□□ 0.33
LSM7-202ENST00000585395 PSMG3Q9BT73 122 aaPredicted RBP17.11■□□□□ 0.33
LSM7-202ENST00000585395 CSMD3Q7Z407 3707 aa17.1■□□□□ 0.33
LSM7-202ENST00000585395 A0A087X0K7 114 aa17.1■□□□□ 0.33
LSM7-202ENST00000585395 APOC4P55056 127 aa17.1■□□□□ 0.33
LSM7-202ENST00000585395 APRG1Q8IVJ8 170 aa17.1■□□□□ 0.33
LSM7-202ENST00000585395 HSD17B11Q8NBQ5 300 aa17.1■□□□□ 0.33
LSM7-202ENST00000585395 CITED4Q96RK1 184 aa17.1■□□□□ 0.33
LSM7-202ENST00000585395 MBP02144 154 aa17.09■□□□□ 0.33
LSM7-202ENST00000585395 RHOBP62745 196 aa17.09■□□□□ 0.33
LSM7-202ENST00000585395 GUK1Q16774 197 aa17.09■□□□□ 0.33
LSM7-202ENST00000585395 LCN15Q6UWW0 184 aa17.09■□□□□ 0.33
LSM7-202ENST00000585395 STHQ8IWL8 128 aa17.09■□□□□ 0.33
LSM7-202ENST00000585395 ST6GAL2Q96JF0 529 aa17.09■□□□□ 0.33
LSM7-202ENST00000585395 TAS2R45P59539 299 aa17.08■□□□□ 0.32
LSM7-202ENST00000585395 SERF2P84101 59 aa17.08■□□□□ 0.32
LSM7-202ENST00000585395 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.08■□□□□ 0.32
LSM7-202ENST00000585395 KCNRGQ8N5I3 272 aa17.08■□□□□ 0.32
LSM7-202ENST00000585395 FAM24BQ8N5W8 94 aa17.08■□□□□ 0.32
LSM7-202ENST00000585395 LINC00052Q96N35 136 aa17.08■□□□□ 0.32
LSM7-202ENST00000585395 ARPC5LQ9BPX5 153 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms