RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 C1QL4Q86Z23 238 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 C11orf44Q8N8P7 122 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 SUN5Q8TC36 379 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 DPF1Q92782 380 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 GPR82Q96P67 336 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 EIF5A2Q9GZV4 153 aaKnown RBP11.22□□□□□ -0.61
SENP3-208ENST00000583277 SMDT1Q9H4I9 107 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 LOC102723971A0A1B0GUV8 181 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 A8MWP6 167 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 OR10J4P0C629 311 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 BMI1P35226 326 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 HAGHQ16775 308 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 ZNF506Q5JVG8 444 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 OR1N2Q8NGR9 330 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 FXYD5Q96DB9 178 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 OR4F4Q96R69 305 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 VAX2Q9UIW0 290 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 U3KQE9 123 aa11.21□□□□□ -0.61
SENP3-208ENST00000583277 A0A1W2PS18 150 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 BUB3O43684 328 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 PYYP10082 97 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 C8orf86Q6ZUL3 223 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 OR8I2Q8N0Y5 310 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 OR11H1Q8NG94 326 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 GRAMD2BQ96HH9 432 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 CITED4Q96RK1 184 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 TXNDC17Q9BRA2 123 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 TMEM231Q9H6L2 316 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 ZNF207O43670 478 aaKnown RBP11.2□□□□□ -0.62
SENP3-208ENST00000583277 CD5P06127 495 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 HIST1H1EP10412 219 aaKnown RBP11.2□□□□□ -0.62
SENP3-208ENST00000583277 NDUFA11Q86Y39 141 aa11.2□□□□□ -0.62
SENP3-208ENST00000583277 A0A1W2PRX2 142 aa11.19□□□□□ -0.62
SENP3-208ENST00000583277 PAGE4O60829 102 aa11.19□□□□□ -0.62
SENP3-208ENST00000583277 NDUFS6O75380 124 aaKnown RBP11.19□□□□□ -0.62
SENP3-208ENST00000583277 GALR1P47211 349 aa11.19□□□□□ -0.62
SENP3-208ENST00000583277 SYNJ2BPP57105 145 aa11.19□□□□□ -0.62
SENP3-208ENST00000583277 MEF2BQ02080 365 aaPredicted RBP11.19□□□□□ -0.62
SENP3-208ENST00000583277 KLF5Q13887 457 aaPredicted RBP11.19□□□□□ -0.62
SENP3-208ENST00000583277 ICAM4Q14773 271 aa11.19□□□□□ -0.62
SENP3-208ENST00000583277 ELOVL1Q9BW60 279 aa11.19□□□□□ -0.62
SENP3-208ENST00000583277 NKX6-2Q9C056 277 aaPredicted RBP11.19□□□□□ -0.62
SENP3-208ENST00000583277 TREM1Q9NP99 234 aa11.19□□□□□ -0.62
SENP3-208ENST00000583277 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
SENP3-208ENST00000583277 A0A1W2PRE2 83 aa11.18□□□□□ -0.62
SENP3-208ENST00000583277 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
SENP3-208ENST00000583277 ATP6V1G1O75348 118 aa11.18□□□□□ -0.62
SENP3-208ENST00000583277 NBEAP1P0C6P0 100 aa11.18□□□□□ -0.62
SENP3-208ENST00000583277 IGLC2P0DOY2 106 aa11.18□□□□□ -0.62
SENP3-208ENST00000583277 UBE2G2P60604 165 aa11.18□□□□□ -0.62
SENP3-208ENST00000583277 FHL3Q13643 280 aa11.18□□□□□ -0.62
SENP3-208ENST00000583277 RARRES2Q99969 163 aa11.18□□□□□ -0.62
SENP3-208ENST00000583277 TMEM213A2RRL7 107 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 FAM74A7A6NL05 159 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 C11orf94C9JXX5 98 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 CCL24O00175 119 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 ATF4P18848 351 aaPredicted RBP11.17□□□□□ -0.62
SENP3-208ENST00000583277 MEOX2P50222 304 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 SLURP1P55000 103 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 SRSF3P84103 164 aaKnown RBP11.17□□□□□ -0.62
SENP3-208ENST00000583277 PDE6HQ13956 83 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 TM4SF20Q53R12 229 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 AWAT1Q58HT5 328 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 CST9LP1Q5W188 147 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 RXFP4Q8TDU9 374 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 RAX2Q96IS3 184 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 PEMTQ9UBM1 199 aa11.17□□□□□ -0.62
SENP3-208ENST00000583277 YTHDF2Q9Y5A9 579 aaKnown RBP11.17□□□□□ -0.62
SENP3-208ENST00000583277 A0A087X0K7 114 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 IGHV3-49A0A0A0MS15 119 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 APOHP02749 345 aaPredicted RBP11.16□□□□□ -0.62
SENP3-208ENST00000583277 BLNKQ8WV28 456 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 GLMPQ8WWB7 406 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 SMPXQ9UHP9 88 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 TRBV19A0A075B6N1 114 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 IGHV3OR16-13A0A075B7E8 117 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 IGHV3-74A0A0B4J1X5 117 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 IGHV3-66A0A0C4DH42 116 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 ADARB2-AS1A8MUL3 147 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 H3BQ15 152 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 M0QZ24 198 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 PDE6DO43924 150 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 KRTAP10-3P60369 221 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 SIGLEC15Q6ZMC9 328 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 TCEAL7Q9BRU2 100 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 RHPN1-AS1Q9BWJ2 59 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 SLC35B3Q9H1N7 401 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
SENP3-208ENST00000583277 TENM1Q9UKZ4 2725 aa11.15□□□□□ -0.62
SENP3-208ENST00000583277 HELTA6NFD8 242 aa11.15□□□□□ -0.62
SENP3-208ENST00000583277 F6UZH7 168 aa11.15□□□□□ -0.62
SENP3-208ENST00000583277 CHEK1O14757 476 aa11.15□□□□□ -0.62
SENP3-208ENST00000583277 ZNF253O75346 499 aa11.15□□□□□ -0.62
SENP3-208ENST00000583277 CD81P60033 236 aa11.15□□□□□ -0.62
SENP3-208ENST00000583277 NSUN5P1Q3KNT7 163 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms