RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 S100A7AQ86SG5 101 aa11.29□□□□□ -0.6
MKS1-210ENST00000581180 GBGT1Q8N5D6 347 aa11.29□□□□□ -0.6
MKS1-210ENST00000581180 OR2G3Q8NGZ4 309 aa11.29□□□□□ -0.6
MKS1-210ENST00000581180 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
MKS1-210ENST00000581180 PSMG3Q9BT73 122 aaPredicted RBP11.29□□□□□ -0.6
MKS1-210ENST00000581180 SLC25A22Q9H936 323 aa11.29□□□□□ -0.6
MKS1-210ENST00000581180 SMAD5-AS1Q9Y6J3 95 aa11.29□□□□□ -0.6
MKS1-210ENST00000581180 K7EQG2 157 aa11.28□□□□□ -0.6
MKS1-210ENST00000581180 BCL2L11O43521 198 aa11.28□□□□□ -0.6
MKS1-210ENST00000581180 CD7P09564 240 aa11.28□□□□□ -0.6
MKS1-210ENST00000581180 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
MKS1-210ENST00000581180 PAFAH1B2P68402 229 aa11.28□□□□□ -0.6
MKS1-210ENST00000581180 DEFA6Q01524 100 aa11.28□□□□□ -0.6
MKS1-210ENST00000581180 DCANP1Q8TF63 244 aa11.28□□□□□ -0.6
MKS1-210ENST00000581180 GPR82Q96P67 336 aa11.28□□□□□ -0.6
MKS1-210ENST00000581180 C19orf73Q9NVV2 129 aa11.28□□□□□ -0.6
MKS1-210ENST00000581180 OR4C46A6NHA9 309 aa11.27□□□□□ -0.61
MKS1-210ENST00000581180 TFPI2P48307 235 aa11.27□□□□□ -0.61
MKS1-210ENST00000581180 STXBP6Q8NFX7 210 aa11.27□□□□□ -0.61
MKS1-210ENST00000581180 SH3BGRL3Q9H299 93 aa11.27□□□□□ -0.61
MKS1-210ENST00000581180 SEPSECSQ9HD40 501 aaKnown RBP11.27□□□□□ -0.61
MKS1-210ENST00000581180 NRN1Q9NPD7 142 aa11.27□□□□□ -0.61
MKS1-210ENST00000581180 RNF24Q9Y225 148 aa11.27□□□□□ -0.61
MKS1-210ENST00000581180 FBN3Q75N90 2809 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 TRAV5A0A0B4J249 113 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 KANTRA0A1W2PQU2 76 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 DNASE2O00115 360 aaPredicted RBP11.26□□□□□ -0.61
MKS1-210ENST00000581180 RPL7P18124 248 aaKnown RBP11.26□□□□□ -0.61
MKS1-210ENST00000581180 GALR1P47211 349 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 CD81P60033 236 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 SERF2P84101 59 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 ODF3L2Q3SX64 289 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 ZFP69Q49AA0 526 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 FAM78BQ5VT40 261 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 SPATA31B1PQ5VZV4 182 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 GTSCR1Q86UQ5 136 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 WFDC3Q8IUB2 231 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 C9orf62Q8N4C0 152 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 FAM24BQ8N5W8 94 aa11.26□□□□□ -0.61
MKS1-210ENST00000581180 GNPNAT1Q96EK6 184 aaPredicted RBP11.26□□□□□ -0.61
MKS1-210ENST00000581180 SOCS3O14543 225 aa11.25□□□□□ -0.61
MKS1-210ENST00000581180 M6PRP20645 277 aa11.25□□□□□ -0.61
MKS1-210ENST00000581180 RAB2AP61019 212 aa11.25□□□□□ -0.61
MKS1-210ENST00000581180 ACOT6Q3I5F7 207 aaPredicted RBP11.25□□□□□ -0.61
MKS1-210ENST00000581180 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.25□□□□□ -0.61
MKS1-210ENST00000581180 MIR17HGQ75NE6 70 aa11.25□□□□□ -0.61
MKS1-210ENST00000581180 FAM167A-AS1Q96KT0 104 aa11.25□□□□□ -0.61
MKS1-210ENST00000581180 FAM110AQ9BQ89 295 aa11.25□□□□□ -0.61
MKS1-210ENST00000581180 MRPL32Q9BYC8 188 aaKnown RBP11.25□□□□□ -0.61
MKS1-210ENST00000581180 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
MKS1-210ENST00000581180 PRKDCP78527 4128 aaKnown RBP11.24□□□□□ -0.61
MKS1-210ENST00000581180 A0A087X0K7 114 aa11.24□□□□□ -0.61
MKS1-210ENST00000581180 PFDN1O60925 122 aa11.24□□□□□ -0.61
MKS1-210ENST00000581180 SPP1P10451 314 aa11.24□□□□□ -0.61
MKS1-210ENST00000581180 BPIFA4PQ86YQ2 179 aa11.24□□□□□ -0.61
MKS1-210ENST00000581180 ZNF471Q9BX82 626 aaPredicted RBP11.24□□□□□ -0.61
MKS1-210ENST00000581180 SLC25A2Q9BXI2 301 aa11.24□□□□□ -0.61
MKS1-210ENST00000581180 WFDC10AQ9H1F0 79 aa11.24□□□□□ -0.61
MKS1-210ENST00000581180 IGLC2P0DOY2 106 aa11.23□□□□□ -0.61
MKS1-210ENST00000581180 RHOBP62745 196 aa11.23□□□□□ -0.61
MKS1-210ENST00000581180 STOML3Q8TAV4 291 aa11.23□□□□□ -0.61
MKS1-210ENST00000581180 MAP6D1Q9H9H5 199 aa11.23□□□□□ -0.61
MKS1-210ENST00000581180 TMEM14CQ9P0S9 112 aa11.23□□□□□ -0.61
MKS1-210ENST00000581180 UBQLN2Q9UHD9 624 aa11.23□□□□□ -0.61
MKS1-210ENST00000581180 A8MZ25 164 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 OR11H12B2RN74 326 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 MBP02144 154 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 ATF4P18848 351 aaPredicted RBP11.22□□□□□ -0.61
MKS1-210ENST00000581180 MEOX2P50222 304 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 CMC4P56277 68 aaPredicted RBP11.22□□□□□ -0.61
MKS1-210ENST00000581180 MEGF8Q7Z7M0 2845 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 RPP25LQ8N5L8 163 aaKnown RBP11.22□□□□□ -0.61
MKS1-210ENST00000581180 OR10G4Q8NGN3 311 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 OR10G9Q8NGN4 311 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 OR10G7Q8NGN6 311 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 RPRMQ9NS64 109 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
MKS1-210ENST00000581180 H3BQ15 152 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 SEC11BP0C7V7 166 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 ZNF688P0C7X2 276 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 NKX2-5P52952 324 aaPredicted RBP11.21□□□□□ -0.61
MKS1-210ENST00000581180 EIF5AP63241 154 aaKnown RBP11.21□□□□□ -0.61
MKS1-210ENST00000581180 TMEM41BQ5BJD5 291 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 SAMD13Q5VXD3 122 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 FAM122CQ6P4D5 195 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 BAP18Q8IXM2 172 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 DEFB125Q8N687 156 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 MRAPQ8TCY5 172 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 ZNF503Q96F45 646 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 CITED4Q96RK1 184 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 HRH4Q9H3N8 390 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 ZNF586Q9NXT0 402 aa11.21□□□□□ -0.61
MKS1-210ENST00000581180 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
MKS1-210ENST00000581180 ISLRO14498 428 aa11.2□□□□□ -0.62
MKS1-210ENST00000581180 EIF3GO75821 320 aaKnown RBP eCLIP11.2□□□□□ -0.62
MKS1-210ENST00000581180 IGHV4-30-4P0DP06 118 aa11.2□□□□□ -0.62
MKS1-210ENST00000581180 PYYP10082 97 aa11.2□□□□□ -0.62
MKS1-210ENST00000581180 TPT1P13693 172 aaKnown RBP11.2□□□□□ -0.62
MKS1-210ENST00000581180 PSMB3P49720 205 aa11.2□□□□□ -0.62
MKS1-210ENST00000581180 DEFB131AP59861 70 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms