RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 ARV1Q9H2C2 271 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 DNAJC4Q9NNZ3 241 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 OR5AC2Q9NZP5 309 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 DOK5Q9P104 306 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 DNAH9Q9NYC9 4486 aa12.08□□□□□ -0.48
IFT20-210ENST00000580357 H0YIZ8 118 aa12.08□□□□□ -0.48
IFT20-210ENST00000580357 EWSR1Q01844 656 aaKnown RBP eCLIP12.08□□□□□ -0.48
IFT20-210ENST00000580357 OR1L4Q8NGR5 311 aa12.08□□□□□ -0.48
IFT20-210ENST00000580357 RNF126Q9BV68 326 aa12.08□□□□□ -0.48
IFT20-210ENST00000580357 SLC25A32Q9H2D1 315 aa12.08□□□□□ -0.48
IFT20-210ENST00000580357 EDA2RQ9HAV5 297 aa12.08□□□□□ -0.48
IFT20-210ENST00000580357 RETNQ9HD89 108 aa12.08□□□□□ -0.48
IFT20-210ENST00000580357 COX7A2P2O60397 106 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 ATF4P18848 351 aaPredicted RBP12.07□□□□□ -0.48
IFT20-210ENST00000580357 PRR20EP86478 221 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 PRR20CP86479 221 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 PRR20DP86480 221 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 PRR20BP86481 221 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 PRR20AP86496 221 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 C10orf113Q5VZT2 155 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 PATE2Q6UY27 113 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
IFT20-210ENST00000580357 OR5C1Q8NGR4 320 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 ASB13Q8WXK3 278 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 C16orf92Q96LL3 132 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 PFDN5Q99471 154 aa12.07□□□□□ -0.48
IFT20-210ENST00000580357 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 SOCS3O14543 225 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 LYL1P12980 280 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 FGF7P21781 194 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 DEFB135Q30KP9 77 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 LINC00305Q7Z4B0 112 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 THAP6Q8TBB0 222 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 CLUHP3Q96NS8 147 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 SCRT1Q9BWW7 348 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 RPRMQ9NS64 109 aa12.06□□□□□ -0.48
IFT20-210ENST00000580357 UBE2L5PA0A1B0GUS4 154 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 H3BMM0 161 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 CA1P00915 261 aaPredicted RBP12.05□□□□□ -0.48
IFT20-210ENST00000580357 RPL12P30050 165 aaKnown RBP12.05□□□□□ -0.48
IFT20-210ENST00000580357 B2MP61769 119 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 FGL1Q08830 312 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 EBLN2Q6P2I7 272 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 BPIFA4PQ86YQ2 179 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 ZNF709Q8N972 641 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 UHRF2Q96PU4 802 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 C1QTNF4Q9BXJ3 329 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 SLC39A9Q9NUM3 307 aa12.05□□□□□ -0.48
IFT20-210ENST00000580357 A0A087X0K7 114 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 HLA-DRB4P13762 266 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 OPCMLQ14982 345 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 MIC13Q5XKP0 118 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 FOXI2Q6ZQN5 318 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 LRRC20Q8TCA0 184 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 TMEM37Q8WXS4 190 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 RARRES2Q99969 163 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 SAV1Q9H4B6 383 aaPredicted RBP12.04□□□□□ -0.48
IFT20-210ENST00000580357 KCNIP2Q9NS61 270 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 HLA-DRB4X5D2U9 266 aa12.04□□□□□ -0.48
IFT20-210ENST00000580357 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
IFT20-210ENST00000580357 CXCL2P19875 107 aa12.03□□□□□ -0.48
IFT20-210ENST00000580357 CXCL3P19876 107 aa12.03□□□□□ -0.48
IFT20-210ENST00000580357 HSPB11Q9Y547 144 aa12.03□□□□□ -0.48
IFT20-210ENST00000580357 PXMP4Q9Y6I8 212 aa12.03□□□□□ -0.48
IFT20-210ENST00000580357 TENM3Q9P273 2699 aa12.03□□□□□ -0.48
IFT20-210ENST00000580357 IFNA5P01569 189 aa12.02□□□□□ -0.49
IFT20-210ENST00000580357 CLINT1Q14677 625 aa12.02□□□□□ -0.49
IFT20-210ENST00000580357 OXA1LQ15070 435 aa12.02□□□□□ -0.49
IFT20-210ENST00000580357 FCN2Q15485 313 aa12.02□□□□□ -0.49
IFT20-210ENST00000580357 ATP5SQ99766 215 aa12.02□□□□□ -0.49
IFT20-210ENST00000580357 NPCDR1Q9BY65 106 aa12.02□□□□□ -0.49
IFT20-210ENST00000580357 WDR61Q9GZS3 305 aaKnown RBP12.02□□□□□ -0.49
IFT20-210ENST00000580357 CLEC5AQ9NY25 188 aa12.02□□□□□ -0.49
IFT20-210ENST00000580357 MBD2Q9UBB5 411 aa12.02□□□□□ -0.49
IFT20-210ENST00000580357 GUK1Q16774 197 aa12.01□□□□□ -0.49
IFT20-210ENST00000580357 OR11H7Q8NGC8 314 aa12.01□□□□□ -0.49
IFT20-210ENST00000580357 OR11H2Q8NH07 326 aa12.01□□□□□ -0.49
IFT20-210ENST00000580357 SCGB1C1Q8TD33 95 aa12.01□□□□□ -0.49
IFT20-210ENST00000580357 C17orf77Q96MU5 243 aa12.01□□□□□ -0.49
IFT20-210ENST00000580357 DUSP14O95147 198 aaKnown RBP12□□□□□ -0.49
IFT20-210ENST00000580357 GIPP09681 153 aaPredicted RBP12□□□□□ -0.49
IFT20-210ENST00000580357 LCN15Q6UWW0 184 aa12□□□□□ -0.49
IFT20-210ENST00000580357 SLC50A1Q9BRV3 221 aa12□□□□□ -0.49
IFT20-210ENST00000580357 PARD6GQ9BYG4 376 aaPredicted RBP12□□□□□ -0.49
IFT20-210ENST00000580357 A0A0J9YX75 114 aa11.99□□□□□ -0.49
IFT20-210ENST00000580357 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
IFT20-210ENST00000580357 GIG44P09565 113 aaPredicted RBP11.99□□□□□ -0.49
IFT20-210ENST00000580357 CASC10Q5T4H9 136 aa11.99□□□□□ -0.49
IFT20-210ENST00000580357 OR4B1Q8NGF8 309 aa11.99□□□□□ -0.49
IFT20-210ENST00000580357 HRH4Q9H3N8 390 aa11.99□□□□□ -0.49
IFT20-210ENST00000580357 A0A0J9YWU9 116 aa11.98□□□□□ -0.49
IFT20-210ENST00000580357 PSG9Q00887 426 aa11.98□□□□□ -0.49
IFT20-210ENST00000580357 PSG3Q16557 428 aa11.98□□□□□ -0.49
IFT20-210ENST00000580357 C20orf173Q96LM9 149 aa11.98□□□□□ -0.49
IFT20-210ENST00000580357 TMEM14CQ9P0S9 112 aa11.98□□□□□ -0.49
IFT20-210ENST00000580357 STAB2Q8WWQ8 2551 aa11.98□□□□□ -0.49
IFT20-210ENST00000580357 TRAV8-2A0A0B4J237 113 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms