RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 SOCS3O14543 225 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 COX7A2P2O60397 106 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 RPL7P18124 248 aaKnown RBP7.42□□□□□ -1.22
MKS1-208ENST00000579358 PSMB3P49720 205 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 B2MP61769 119 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 CLINT1Q14677 625 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 MIC13Q5XKP0 118 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 PATE2Q6UY27 113 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 OR1L4Q8NGR5 311 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 RCHY1Q96PM5 261 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 UHRF2Q96PU4 802 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 PFDN5Q99471 154 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 SCRT1Q9BWW7 348 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 NPCDR1Q9BY65 106 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 WDR61Q9GZS3 305 aaKnown RBP7.42□□□□□ -1.22
MKS1-208ENST00000579358 KCNIP2Q9NS61 270 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 SLC39A9Q9NUM3 307 aa7.42□□□□□ -1.22
MKS1-208ENST00000579358 ISLRO14498 428 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 ID1P41134 155 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 ZNF124Q15973 351 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 PSMG4Q5JS54 123 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 DMRTA1Q5VZB9 504 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 C10orf113Q5VZT2 155 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 LEMD1Q68G75 181 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 LINC00305Q7Z4B0 112 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 TMEM37Q8WXS4 190 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 AQP10Q96PS8 301 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 PARD6GQ9BYG4 376 aaPredicted RBP7.41□□□□□ -1.22
MKS1-208ENST00000579358 PXMP4Q9Y6I8 212 aa7.41□□□□□ -1.22
MKS1-208ENST00000579358 A0A087X0K7 114 aa7.4□□□□□ -1.22
MKS1-208ENST00000579358 C17orf112F2Z3M2 114 aa7.4□□□□□ -1.22
MKS1-208ENST00000579358 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.4□□□□□ -1.22
MKS1-208ENST00000579358 Q6ZWC4 215 aa7.4□□□□□ -1.22
MKS1-208ENST00000579358 TRPT1Q86TN4 253 aaKnown RBP7.4□□□□□ -1.22
MKS1-208ENST00000579358 STHQ8IWL8 128 aa7.4□□□□□ -1.22
MKS1-208ENST00000579358 ZNF709Q8N972 641 aa7.4□□□□□ -1.22
MKS1-208ENST00000579358 GATAD1Q8WUU5 269 aa7.4□□□□□ -1.22
MKS1-208ENST00000579358 DNAJC4Q9NNZ3 241 aa7.4□□□□□ -1.22
MKS1-208ENST00000579358 TP53TG1Q9Y2A0 90 aa7.4□□□□□ -1.22
MKS1-208ENST00000579358 MRPS12O15235 138 aaKnown RBP7.39□□□□□ -1.23
MKS1-208ENST00000579358 IFNA5P01569 189 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 RPL35AP18077 110 aaKnown RBP7.39□□□□□ -1.23
MKS1-208ENST00000579358 ATF4P18848 351 aaPredicted RBP7.39□□□□□ -1.23
MKS1-208ENST00000579358 CXCL2P19875 107 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 TMEM41BQ5BJD5 291 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 BPIFA4PQ86YQ2 179 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 OR2T35Q8NGX2 323 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 C16orf92Q96LL3 132 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 C17orf77Q96MU5 243 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 WWC2-AS2Q96NR7 200 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 RSG1Q9BU20 258 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 CSTL1Q9H114 145 aa7.39□□□□□ -1.23
MKS1-208ENST00000579358 KNCNA6PVL3 124 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 SPP1P10451 314 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 HLA-DRB4P13762 266 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 ZNF266Q14584 549 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 Q5BKY6 102 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 ACTL10Q5JWF8 245 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 MORN5Q5VZ52 161 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 SPATA31B1PQ5VZV4 182 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 MORN3Q6PF18 240 aaPredicted RBP7.38□□□□□ -1.23
MKS1-208ENST00000579358 FOXI2Q6ZQN5 318 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 SCGB1C1Q8TD33 95 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 SMIM3Q9BZL3 60 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 RETNQ9HD89 108 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 HLA-DRB4X5D2U9 266 aa7.38□□□□□ -1.23
MKS1-208ENST00000579358 RNF222A6NCQ9 220 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 H3BMM0 161 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 LCN15Q6UWW0 184 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 INO80EQ8NBZ0 244 aaPredicted RBP7.37□□□□□ -1.23
MKS1-208ENST00000579358 LINC00052Q96N35 136 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 CLUHP3Q96NS8 147 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 OVOL2Q9BRP0 275 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 SLC50A1Q9BRV3 221 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 MRPL32Q9BYC8 188 aaKnown RBP7.37□□□□□ -1.23
MKS1-208ENST00000579358 SAV1Q9H4B6 383 aaPredicted RBP7.37□□□□□ -1.23
MKS1-208ENST00000579358 WFDC1Q9HC57 220 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 RPRMQ9NS64 109 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 TNFSF18Q9UNG2 199 aa7.37□□□□□ -1.23
MKS1-208ENST00000579358 FXYD6-FXYD2A0A087WZ82 144 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 TRAV8-2A0A0B4J237 113 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 G3V3Q6 166 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 SPRY2O43597 315 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 CA1P00915 261 aaPredicted RBP7.36□□□□□ -1.23
MKS1-208ENST00000579358 IGLC2P0DOY2 106 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 NUTF2P61970 127 aaKnown RBP7.36□□□□□ -1.23
MKS1-208ENST00000579358 GUK1Q16774 197 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 DEFB135Q30KP9 77 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 GCSAMLQ5JQS6 135 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 FAM78BQ5VT40 261 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 RNF183Q96D59 192 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 HRH4Q9H3N8 390 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 EDA2RQ9HAV5 297 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 TMEM14CQ9P0S9 112 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 TIMM9Q9Y5J7 89 aa7.36□□□□□ -1.23
MKS1-208ENST00000579358 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
MKS1-208ENST00000579358 A0A0J9YX75 114 aa7.35□□□□□ -1.23
MKS1-208ENST00000579358 ZNF253O75346 499 aa7.35□□□□□ -1.23
MKS1-208ENST00000579358 FFAR4Q5NUL3 377 aa7.35□□□□□ -1.23
MKS1-208ENST00000579358 EBLN2Q6P2I7 272 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms