RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 OR2F1Q13607 317 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF345Q14585 488 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 ATP6V1FQ16864 119 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 FAM106AQ4KMX7 169 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 GCSAMLQ5JQS6 135 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 MIC13Q5XKP0 118 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 LAMTOR1Q6IAA8 161 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 TMEM217Q8N7C4 229 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 OR51G1Q8NGK1 321 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 OR2T35Q8NGX2 323 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 FAM167A-AS1Q96KT0 104 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 PRR25Q96S07 402 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 ATP5SQ99766 215 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 ELOVL1Q9BW60 279 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 RHPN1-AS1Q9BWJ2 59 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 SCRT1Q9BWW7 348 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 NPCDR1Q9BY65 106 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 WFDC10AQ9H1F0 79 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 SLC25A32Q9H2D1 315 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 UQCC1Q9NVA1 299 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 PEMTQ9UBM1 199 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 UFC1Q9Y3C8 167 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 DNAH7Q8WXX0 4024 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 NACAE9PAV3 2078 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 NBEAL2Q6ZNJ1 2754 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 DNAH1Q9P2D7 4330 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 A0A087X0K7 114 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 TRAV2A0A0B4J234 112 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 TRAV8-2A0A0B4J237 113 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 TRAV25A0A0B4J276 109 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 IGHV3-66A0A0C4DH42 116 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF320A2RRD8 509 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 ZFP92A6NM28 416 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 A8MTW9 85 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 A8MZ25 164 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 K7EQG2 157 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 MPDU1O75352 247 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 DFFBO76075 338 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 C1QBP02746 253 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 HNRNPCP07910 306 aaKnown RBP eCLIP2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 OR5G3P0C626 314 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 PET100P0DJ07 73 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 IGLC2P0DOY2 106 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 GP9P14770 177 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 CAMLGP49069 296 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 EIF2B2P49770 351 aaKnown RBP2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SELENOTP62341 195 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 HBG1P69891 147 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 HBG2P69892 147 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 AKR1C1Q04828 323 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 CLINT1Q14677 625 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SPATA31B1PQ5VZV4 182 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 RPL7L1Q6DKI1 246 aaKnown RBP2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SSX7Q7RTT5 188 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF546Q86UE3 836 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 STX12Q86Y82 276 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 C9orf62Q8N4C0 152 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 KCNRGQ8N5I3 272 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 BPIFCQ8NFQ6 507 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 OR2G3Q8NGZ4 309 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 THAP6Q8TBB0 222 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 Q8WTZ3 238 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 UHRF2Q96PU4 802 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SPAG8Q99932 426 aaPredicted RBP2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 FAM110AQ9BQ89 295 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SHANK2-AS3Q9BTD1 123 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 RSG1Q9BU20 258 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 C20orf24Q9BUV8 137 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SLC25A39Q9BZJ4 359 aaPredicted RBP2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 GPR61Q9BZJ8 451 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SMIM3Q9BZL3 60 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SLC25A31Q9H0C2 315 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SH3BGRL3Q9H299 93 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 SLC39A9Q9NUM3 307 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 PAIP2BQ9ULR5 123 aaKnown RBP2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 PXMP4Q9Y6I8 212 aa2.8□□□□□ -1.96
SMARCE1-215ENST00000578995 hCG_2014768A0A024R1R8 64 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 FXYD6-FXYD2A0A087WZ82 144 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 TRAV5A0A0B4J249 113 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 SMCO3A2RU48 225 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 RBMY1BA6NDE4 496 aaKnown RBP2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 RBMY1EA6NEQ0 496 aaKnown RBP2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF98A6NK75 572 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 H3BQ15 152 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 ARPC5O15511 151 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 NDUFB4O95168 129 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 CFDP00746 253 aaPredicted RBP2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 RLN2P04090 185 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 GIG44P09565 113 aaPredicted RBP2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 RBMY1DP0C7P1 496 aaKnown RBP2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 FGF7P21781 194 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 NPPCP23582 126 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 ATP6V0CP27449 155 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 LYZP61626 148 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 DEFA6Q01524 100 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 FGL1Q08830 312 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF726P1Q15940 193 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 LGALSLQ3ZCW2 172 aaPredicted RBP2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 C1orf194Q5T5A4 169 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms