RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 PMCHP20382 165 aa13.84□□□□□ -0.19
ERBB2-205ENST00000578199 TOMM20LQ6UXN7 152 aa13.84□□□□□ -0.19
ERBB2-205ENST00000578199 GOLT1AQ6ZVE7 132 aa13.84□□□□□ -0.19
ERBB2-205ENST00000578199 TSKUQ8WUA8 353 aa13.84□□□□□ -0.19
ERBB2-205ENST00000578199 A0A1W2PS18 150 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 GPX1P07203 203 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 FAM19A2Q8N3H0 131 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 FANCD2OSQ96PS1 177 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 FCGR2BP31994 310 aaPredicted RBP13.83□□□□□ -0.2
ERBB2-205ENST00000578199 BRS3P32247 399 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 UQCRFS1P47985 274 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 PRNTQ86SH4 94 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 DTX2Q86UW9 622 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 VN1R17PQ8TDU5 208 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 FMC1Q96HJ9 113 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 FBXL7Q9UJT9 491 aa13.83□□□□□ -0.2
ERBB2-205ENST00000578199 MAP1AP78559 2803 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-205ENST00000578199 HOXB4P17483 251 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-205ENST00000578199 SIGLECL1Q8N7X8 197 aa13.82□□□□□ -0.2
ERBB2-205ENST00000578199 GTSF1Q8WW33 167 aa13.82□□□□□ -0.2
ERBB2-205ENST00000578199 RNF125Q96EQ8 232 aa13.82□□□□□ -0.2
ERBB2-205ENST00000578199 TBL2Q9Y4P3 447 aaKnown RBP13.82□□□□□ -0.2
ERBB2-205ENST00000578199 OR10J3Q5JRS4 329 aa13.82□□□□□ -0.2
ERBB2-205ENST00000578199 SRSF8Q9BRL6 282 aaKnown RBP13.82□□□□□ -0.2
ERBB2-205ENST00000578199 CACNA1BQ00975 2339 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 GNG7O60262 68 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 IGLV2-11P01706 119 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 AMTP48728 403 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 COX19Q49B96 90 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 OR2D3Q8NGH3 330 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 ARPC1AQ92747 370 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 SHANK2-AS3Q9BTD1 123 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 OTORQ9NRC9 128 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 KRTDAPP60985 99 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 FAM120AOSQ5T036 256 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 PGLYRP4Q96LB8 373 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 RPP21Q9H633 154 aaKnown RBP13.81□□□□□ -0.2
ERBB2-205ENST00000578199 TMEM14CQ9P0S9 112 aa13.81□□□□□ -0.2
ERBB2-205ENST00000578199 SPTAN1Q13813 2472 aaKnown RBP13.8□□□□□ -0.2
ERBB2-205ENST00000578199 P01737 135 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 ZNF562Q6V9R5 426 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 C18orf32Q8TCD1 76 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 IGLV11-55A0A075B6I3 123 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 TRBV19A0A075B6N1 114 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 C19orf71A6NCJ1 209 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 H3BRN7 92 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 C19orf84I3L1E1 186 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 ZNF25P17030 456 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-205ENST00000578199 Q86TA4 180 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 BPIFA4PQ86YQ2 179 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 WIPF2Q8TF74 440 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-205ENST00000578199 KCNS1Q96KK3 526 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 SNHG12Q9BXW3 62 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 PRSS22Q9GZN4 317 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 NRN1Q9NPD7 142 aa13.8□□□□□ -0.2
ERBB2-205ENST00000578199 F8W735 103 aaPredicted RBP13.79□□□□□ -0.2
ERBB2-205ENST00000578199 OR2J3O76001 311 aa13.79□□□□□ -0.2
ERBB2-205ENST00000578199 Q56UQ5 140 aa13.79□□□□□ -0.2
ERBB2-205ENST00000578199 C1orf194Q5T5A4 169 aa13.79□□□□□ -0.2
ERBB2-205ENST00000578199 IGHV3OR16-8A0A075B7F1 116 aa13.79□□□□□ -0.2
ERBB2-205ENST00000578199 M0R3E3 92 aa13.79□□□□□ -0.2
ERBB2-205ENST00000578199 NDUFB8O95169 186 aa13.79□□□□□ -0.2
ERBB2-205ENST00000578199 TMEM11P17152 192 aa13.79□□□□□ -0.2
ERBB2-205ENST00000578199 NTF3P20783 257 aa13.79□□□□□ -0.2
ERBB2-205ENST00000578199 DAZAP1Q96EP5 407 aaKnown RBP13.79□□□□□ -0.2
ERBB2-205ENST00000578199 CHRDL1Q9BU40 450 aa13.79□□□□□ -0.2
ERBB2-205ENST00000578199 IGHV3-35A0A0C4DH35 117 aa13.78□□□□□ -0.2
ERBB2-205ENST00000578199 IGLC2P0DOY2 106 aa13.78□□□□□ -0.2
ERBB2-205ENST00000578199 LPAR2Q9HBW0 351 aa13.78□□□□□ -0.2
ERBB2-205ENST00000578199 PAM16Q9Y3D7 125 aa13.78□□□□□ -0.2
ERBB2-205ENST00000578199 OR2T8A6NH00 312 aa13.78□□□□□ -0.2
ERBB2-205ENST00000578199 ZNF785A8K8V0 405 aa13.78□□□□□ -0.2
ERBB2-205ENST00000578199 Q8N6K4 173 aa13.78□□□□□ -0.2
ERBB2-205ENST00000578199 OR4F17Q8NGA8 305 aa13.78□□□□□ -0.2
ERBB2-205ENST00000578199 SIRPDQ9H106 197 aa13.78□□□□□ -0.2
ERBB2-205ENST00000578199 WI2-2373I1.2A0A1W2PRP0 233 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 HLA-DRB1P01911 266 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 EGR2P11161 476 aaPredicted RBP13.77□□□□□ -0.21
ERBB2-205ENST00000578199 COL8A1P27658 744 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 SIGLEC15Q6ZMC9 328 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 SMIM12Q96EX1 92 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 A0A1B0GXF2 115 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 ZNF324O75467 553 aaPredicted RBP13.77□□□□□ -0.21
ERBB2-205ENST00000578199 MFAP4P55083 255 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 CCDC144NLQ6NUI1 221 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 C1orf122Q6ZSJ8 110 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 ZNF414Q96IQ9 312 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 BPESC1Q9GZL8 116 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 GOLT1BQ9Y3E0 138 aa13.77□□□□□ -0.21
ERBB2-205ENST00000578199 SH2D7A6NKC9 451 aaPredicted RBP13.76□□□□□ -0.21
ERBB2-205ENST00000578199 NPIPB5A8MRT5 1133 aa13.76□□□□□ -0.21
ERBB2-205ENST00000578199 A8MWL6 223 aa13.76□□□□□ -0.21
ERBB2-205ENST00000578199 MRPS12O15235 138 aaKnown RBP13.76□□□□□ -0.21
ERBB2-205ENST00000578199 RASL11AQ6T310 242 aa13.76□□□□□ -0.21
ERBB2-205ENST00000578199 TTC9CQ8N5M4 171 aa13.76□□□□□ -0.21
ERBB2-205ENST00000578199 ALKBH7Q9BT30 221 aaPredicted RBP13.76□□□□□ -0.21
ERBB2-205ENST00000578199 IGHV7-81A0A0B4J1V7 117 aa13.75□□□□□ -0.21
ERBB2-205ENST00000578199 GNLYP22749 145 aa13.75□□□□□ -0.21
ERBB2-205ENST00000578199 FOXA3P55318 350 aaPredicted RBP13.75□□□□□ -0.21
ERBB2-205ENST00000578199 NIT1Q86X76 327 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms