RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PXDC1Q5TGL8 231 aa9.4□□□□□ -0.9
CCDC57-211ENST00000578187 OR8I2Q8N0Y5 310 aa9.4□□□□□ -0.9
CCDC57-211ENST00000578187 OR11H7Q8NGC8 314 aa9.4□□□□□ -0.9
CCDC57-211ENST00000578187 SHANK2-AS3Q9BTD1 123 aa9.4□□□□□ -0.9
CCDC57-211ENST00000578187 RNF126Q9BV68 326 aa9.4□□□□□ -0.9
CCDC57-211ENST00000578187 SCRT1Q9BWW7 348 aa9.4□□□□□ -0.9
CCDC57-211ENST00000578187 SLC25A39Q9BZJ4 359 aaPredicted RBP9.4□□□□□ -0.9
CCDC57-211ENST00000578187 SLC25A31Q9H0C2 315 aa9.4□□□□□ -0.9
CCDC57-211ENST00000578187 SLC25A32Q9H2D1 315 aa9.4□□□□□ -0.9
CCDC57-211ENST00000578187 HIGD1AQ9Y241 93 aa9.4□□□□□ -0.9
CCDC57-211ENST00000578187 STARD9Q9P2P6 4700 aa9.4□□□□□ -0.91
CCDC57-211ENST00000578187 A0A0J9YWU9 116 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 SOCS3O14543 225 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 CAMLGP49069 296 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 RAP2BP61225 183 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 NHLH2Q02577 135 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 PMS2P11Q13670 270 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 OXA1LQ15070 435 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 LEMD1Q68G75 181 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 CHAC2Q8WUX2 184 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 MBD2Q9UBB5 411 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 KLK5Q9Y337 293 aaPredicted RBP9.39□□□□□ -0.91
CCDC57-211ENST00000578187 AGRNO00468 2067 aa9.39□□□□□ -0.91
CCDC57-211ENST00000578187 OR5G3P0C626 314 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 RPL35AP18077 110 aaKnown RBP9.38□□□□□ -0.91
CCDC57-211ENST00000578187 GALR1P47211 349 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 SNRPD3P62318 126 aaKnown RBP9.38□□□□□ -0.91
CCDC57-211ENST00000578187 RAB31Q13636 194 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 OPCMLQ14982 345 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 FCN2Q15485 313 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 PATE2Q6UY27 113 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 OR5C1Q8NGR4 320 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 RNF183Q96D59 192 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 GPR82Q96P67 336 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 UHRF2Q96PU4 802 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 ARL6Q9H0F7 186 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 MED28Q9H204 178 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 ARV1Q9H2C2 271 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 SLC25A22Q9H936 323 aa9.38□□□□□ -0.91
CCDC57-211ENST00000578187 MPDU1O75352 247 aa9.37□□□□□ -0.91
CCDC57-211ENST00000578187 ATF4P18848 351 aaPredicted RBP9.37□□□□□ -0.91
CCDC57-211ENST00000578187 FGF7P21781 194 aa9.37□□□□□ -0.91
CCDC57-211ENST00000578187 PSMB3P49720 205 aa9.37□□□□□ -0.91
CCDC57-211ENST00000578187 MEOX2P50222 304 aa9.37□□□□□ -0.91
CCDC57-211ENST00000578187 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
CCDC57-211ENST00000578187 SAMD13Q5VXD3 122 aa9.37□□□□□ -0.91
CCDC57-211ENST00000578187 S100A7AQ86SG5 101 aa9.37□□□□□ -0.91
CCDC57-211ENST00000578187 TRPT1Q86TN4 253 aaKnown RBP9.37□□□□□ -0.91
CCDC57-211ENST00000578187 C17orf77Q96MU5 243 aa9.37□□□□□ -0.91
CCDC57-211ENST00000578187 RYR2Q92736 4967 aa9.37□□□□□ -0.91
CCDC57-211ENST00000578187 ELOA3CA0A087WX78 387 aaPredicted RBP9.36□□□□□ -0.91
CCDC57-211ENST00000578187 ISLRO14498 428 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 LY6G6CO95867 125 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 RPL7P18124 248 aaKnown RBP9.36□□□□□ -0.91
CCDC57-211ENST00000578187 RPL29P47914 159 aaKnown RBP9.36□□□□□ -0.91
CCDC57-211ENST00000578187 MIC13Q5XKP0 118 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 STHQ8IWL8 128 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 GATAD1Q8WUU5 269 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 ASB13Q8WXK3 278 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 LINC00476Q8WZB0 136 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 NPCDR1Q9BY65 106 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 CSTL1Q9H114 145 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 RNF24Q9Y225 148 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 HSPB11Q9Y547 144 aa9.36□□□□□ -0.91
CCDC57-211ENST00000578187 DYNC2H1Q8NCM8 4307 aaKnown RBP9.35□□□□□ -0.91
CCDC57-211ENST00000578187 A0A087X0K7 114 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 MRPS12O15235 138 aaKnown RBP9.35□□□□□ -0.91
CCDC57-211ENST00000578187 COX7A2P2O60397 106 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 GIPP09681 153 aaPredicted RBP9.35□□□□□ -0.91
CCDC57-211ENST00000578187 RPL12P30050 165 aaKnown RBP9.35□□□□□ -0.91
CCDC57-211ENST00000578187 ID1P41134 155 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 B2MP61769 119 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 CLINT1Q14677 625 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 CEMP1Q6PRD7 247 aaPredicted RBP9.35□□□□□ -0.91
CCDC57-211ENST00000578187 Q6ZRG5 221 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 OR1L4Q8NGR5 311 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 THAP6Q8TBB0 222 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 PFDN5Q99471 154 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 RSG1Q9BU20 258 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 SLC39A9Q9NUM3 307 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 PXMP4Q9Y6I8 212 aa9.35□□□□□ -0.91
CCDC57-211ENST00000578187 SPP1P10451 314 aa9.34□□□□□ -0.91
CCDC57-211ENST00000578187 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
CCDC57-211ENST00000578187 TNP2Q05952 138 aa9.34□□□□□ -0.91
CCDC57-211ENST00000578187 ACTL10Q5JWF8 245 aa9.34□□□□□ -0.91
CCDC57-211ENST00000578187 C10orf113Q5VZT2 155 aa9.34□□□□□ -0.91
CCDC57-211ENST00000578187 ATP5SQ99766 215 aa9.34□□□□□ -0.91
CCDC57-211ENST00000578187 WDR61Q9GZS3 305 aaKnown RBP9.34□□□□□ -0.91
CCDC57-211ENST00000578187 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
CCDC57-211ENST00000578187 MORN5Q5VZ52 161 aa9.33□□□□□ -0.92
CCDC57-211ENST00000578187 MORN3Q6PF18 240 aaPredicted RBP9.33□□□□□ -0.92
CCDC57-211ENST00000578187 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
CCDC57-211ENST00000578187 RARRES2Q99969 163 aa9.33□□□□□ -0.92
CCDC57-211ENST00000578187 MFFQ9GZY8 342 aa9.33□□□□□ -0.92
CCDC57-211ENST00000578187 SAV1Q9H4B6 383 aaPredicted RBP9.33□□□□□ -0.92
CCDC57-211ENST00000578187 DNAJC4Q9NNZ3 241 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms