RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 OR5G3P0C626 314 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 ID1P41134 155 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 GALR1P47211 349 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 PLP1P60201 277 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 ATP6V1FQ16864 119 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 LRRC37A5PQ49AS3 106 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 PSMG4Q5JS54 123 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 PXDC1Q5TGL8 231 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 GPR82Q96P67 336 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 SLC25A31Q9H0C2 315 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 SLC25A22Q9H936 323 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 UQCC1Q9NVA1 299 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 RNF24Q9Y225 148 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 HIGD1AQ9Y241 93 aa11.74□□□□□ -0.53
VAPA-204ENST00000577901 IGSF23A1L1A6 192 aa11.73□□□□□ -0.53
VAPA-204ENST00000577901 AGPAT2O15120 278 aa11.73□□□□□ -0.53
VAPA-204ENST00000577901 H2BFSP57053 126 aa11.73□□□□□ -0.53
VAPA-204ENST00000577901 SAMD13Q5VXD3 122 aa11.73□□□□□ -0.53
VAPA-204ENST00000577901 PHLDA1Q8WV24 401 aaPredicted RBP11.73□□□□□ -0.53
VAPA-204ENST00000577901 SLC25A39Q9BZJ4 359 aaPredicted RBP11.73□□□□□ -0.53
VAPA-204ENST00000577901 ARL6Q9H0F7 186 aa11.73□□□□□ -0.53
VAPA-204ENST00000577901 DOK5Q9P104 306 aa11.73□□□□□ -0.53
VAPA-204ENST00000577901 MEOX2P50222 304 aa11.72□□□□□ -0.53
VAPA-204ENST00000577901 VWC2Q2TAL6 325 aa11.72□□□□□ -0.53
VAPA-204ENST00000577901 ACTL10Q5JWF8 245 aa11.72□□□□□ -0.53
VAPA-204ENST00000577901 PPP1R1CQ8WVI7 109 aa11.72□□□□□ -0.53
VAPA-204ENST00000577901 SLC25A32Q9H2D1 315 aa11.72□□□□□ -0.53
VAPA-204ENST00000577901 VPS13DQ5THJ4 4388 aa11.72□□□□□ -0.53
VAPA-204ENST00000577901 PET100P0DJ07 73 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 CAMLGP49069 296 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 LGALS9CQ6DKI2 356 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 Q6ZRG5 221 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 LINC00052Q96N35 136 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 MGST2Q99735 147 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 SHANK2-AS3Q9BTD1 123 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 RSG1Q9BU20 258 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 SCRT1Q9BWW7 348 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 OR5AC2Q9NZP5 309 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 ALG5Q9Y673 324 aa11.71□□□□□ -0.53
VAPA-204ENST00000577901 KNCNA6PVL3 124 aa11.7□□□□□ -0.54
VAPA-204ENST00000577901 H3BRN7 92 aa11.7□□□□□ -0.54
VAPA-204ENST00000577901 ISLRO14498 428 aa11.7□□□□□ -0.54
VAPA-204ENST00000577901 RPL7P18124 248 aaKnown RBP11.7□□□□□ -0.54
VAPA-204ENST00000577901 PSMB3P49720 205 aa11.7□□□□□ -0.54
VAPA-204ENST00000577901 BAXQ07812 192 aa11.7□□□□□ -0.54
VAPA-204ENST00000577901 MORN3Q6PF18 240 aaPredicted RBP11.7□□□□□ -0.54
VAPA-204ENST00000577901 TRPT1Q86TN4 253 aaKnown RBP11.7□□□□□ -0.54
VAPA-204ENST00000577901 ARV1Q9H2C2 271 aa11.7□□□□□ -0.54
VAPA-204ENST00000577901 PCLOQ9Y6V0 5065 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 ELOA3CA0A087WX78 387 aaPredicted RBP11.69□□□□□ -0.54
VAPA-204ENST00000577901 UBE2L5PA0A1B0GUS4 154 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 H0YIZ8 118 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 MPC2O95563 127 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 CA1P00915 261 aaPredicted RBP11.69□□□□□ -0.54
VAPA-204ENST00000577901 SPP1P10451 314 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 NHLH2Q02577 135 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 C16orf92Q96LL3 132 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 UHRF2Q96PU4 802 aa11.69□□□□□ -0.54
VAPA-204ENST00000577901 SOCS3O14543 225 aa11.68□□□□□ -0.54
VAPA-204ENST00000577901 COX7A2P2O60397 106 aa11.68□□□□□ -0.54
VAPA-204ENST00000577901 MPDU1O75352 247 aa11.68□□□□□ -0.54
VAPA-204ENST00000577901 FGF7P21781 194 aa11.68□□□□□ -0.54
VAPA-204ENST00000577901 PATE2Q6UY27 113 aa11.68□□□□□ -0.54
VAPA-204ENST00000577901 LINC00305Q7Z4B0 112 aa11.68□□□□□ -0.54
VAPA-204ENST00000577901 OR5C1Q8NGR4 320 aa11.68□□□□□ -0.54
VAPA-204ENST00000577901 RNF126Q9BV68 326 aa11.68□□□□□ -0.54
VAPA-204ENST00000577901 DNAJC4Q9NNZ3 241 aa11.68□□□□□ -0.54
VAPA-204ENST00000577901 RPL29P47914 159 aaKnown RBP11.67□□□□□ -0.54
VAPA-204ENST00000577901 NUTF2P61970 127 aaKnown RBP11.67□□□□□ -0.54
VAPA-204ENST00000577901 FGL1Q08830 312 aa11.67□□□□□ -0.54
VAPA-204ENST00000577901 RGS21Q2M5E4 152 aa11.67□□□□□ -0.54
VAPA-204ENST00000577901 C10orf113Q5VZT2 155 aa11.67□□□□□ -0.54
VAPA-204ENST00000577901 OR1L4Q8NGR5 311 aa11.67□□□□□ -0.54
VAPA-204ENST00000577901 CHAC2Q8WUX2 184 aa11.67□□□□□ -0.54
VAPA-204ENST00000577901 MED28Q9H204 178 aa11.67□□□□□ -0.54
VAPA-204ENST00000577901 DNAH6Q9C0G6 4158 aa11.67□□□□□ -0.54
VAPA-204ENST00000577901 NANOS2P60321 138 aaKnown RBP11.66□□□□□ -0.54
VAPA-204ENST00000577901 PRR20EP86478 221 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 PRR20CP86479 221 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 PRR20DP86480 221 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 PRR20BP86481 221 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 PRR20AP86496 221 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 SPATA31B1PQ5VZV4 182 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 MIC13Q5XKP0 118 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 FOXI2Q6ZQN5 318 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 C11orf45Q8TAV5 145 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 TMEM37Q8WXS4 190 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 PFDN5Q99471 154 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 RARRES2Q99969 163 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 MFFQ9GZY8 342 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 RPRMQ9NS64 109 aa11.66□□□□□ -0.54
VAPA-204ENST00000577901 H3BMM0 161 aa11.65□□□□□ -0.54
VAPA-204ENST00000577901 HLA-DRB4P13762 266 aa11.65□□□□□ -0.54
VAPA-204ENST00000577901 CXCL3P19876 107 aa11.65□□□□□ -0.54
VAPA-204ENST00000577901 B2MP61769 119 aa11.65□□□□□ -0.54
VAPA-204ENST00000577901 OPCMLQ14982 345 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms