RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 SIGLEC9Q9Y336 463 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 NUP210Q8TEM1 1887 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-205ENST00000577827 IGHV3OR16-13A0A075B7E8 117 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 IGHV3-74A0A0B4J1X5 117 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 TIMM23O14925 209 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 COX8AP10176 69 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 TMEM75Q8N9X5 138 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 NUP37Q8NFH4 326 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 TRAV8-1A0A0A6YYK1 113 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 IGHV1-3A0A0C4DH29 117 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 HAX1O00165 279 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 ZNF138P52744 262 aa8.42□□□□□ -1.06
PTPRM-205ENST00000577827 KLF5Q13887 457 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-205ENST00000577827 CNOT1A5YKK6 2376 aaKnown RBP8.41□□□□□ -1.06
PTPRM-205ENST00000577827 KIAA1671Q9BY89 1806 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 MBD3L4A6NDZ8 208 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-205ENST00000577827 MBD3L3A6NE82 208 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-205ENST00000577827 C9orf118A6NHY6 69 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 MBD3L5A6NJ08 208 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-205ENST00000577827 SH2D1AO60880 128 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 CEACAM4O75871 244 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 GATA4P43694 442 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 C19orf54Q5BKX5 351 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 MBD3L2Q8NHZ7 208 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-205ENST00000577827 SHANK2-AS3Q9BTD1 123 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 LSM4Q9Y4Z0 139 aaKnown RBP8.41□□□□□ -1.06
PTPRM-205ENST00000577827 ROS1P08922 2347 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 DENND4AQ7Z401 1863 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 OOSP1A8MZH6 123 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 K7EN84 100 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 RHOGP84095 191 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 TEX29Q8N6K0 151 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 WNK2Q9Y3S1 2297 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 ARMS2P0C7Q2 107 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 EMP1P54849 157 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 LGALS9BQ3B8N2 356 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 ZC2HC1BQ5TFG8 222 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 LGALS9CQ6DKI2 356 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 CLEC19AQ6UXS0 136 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 GTSCR1Q86UQ5 136 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 DYNLRB2Q8TF09 96 aa8.41□□□□□ -1.06
PTPRM-205ENST00000577827 BEX4Q9NWD9 120 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-205ENST00000577827 MYO7BQ6PIF6 2116 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 ZNF407Q9C0G0 2248 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 IGHV1-24A0A0C4DH33 117 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 A0A1W2PPI3 338 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 DKK1O94907 266 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 NCR2O95944 276 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 EVI2AP22794 236 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 IFI27P40305 119 aaPredicted RBP8.4□□□□□ -1.06
PTPRM-205ENST00000577827 KIR3DL3Q8N743 410 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 DDB2Q92466 427 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 DOCK7Q96N67 2140 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 C3orf36Q3SXR2 165 aa8.4□□□□□ -1.06
PTPRM-205ENST00000577827 NAA38Q9BRA0 125 aaKnown RBP8.4□□□□□ -1.06
PTPRM-205ENST00000577827 OVOL1O14753 267 aa8.4□□□□□ -1.07
PTPRM-205ENST00000577827 FAM104BQ5XKR9 115 aa8.4□□□□□ -1.07
PTPRM-205ENST00000577827 AMN1Q8IY45 258 aa8.4□□□□□ -1.07
PTPRM-205ENST00000577827 RCHY1Q96PM5 261 aa8.4□□□□□ -1.07
PTPRM-205ENST00000577827 CHAC1Q9BUX1 264 aa8.4□□□□□ -1.07
PTPRM-205ENST00000577827 FER1L5A0AVI2 2057 aa8.4□□□□□ -1.07
PTPRM-205ENST00000577827 IGKV2-40A0A087WW87 121 aaPredicted RBP8.39□□□□□ -1.07
PTPRM-205ENST00000577827 TRAV8-2A0A0B4J237 113 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 NDUFS8O00217 210 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 IGKV2D-40P01614 121 aaPredicted RBP8.39□□□□□ -1.07
PTPRM-205ENST00000577827 CLEC2AQ6UVW9 174 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 UNQ6494/PRO21346Q6UXR6 183 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 IGHV3-49A0A0A0MS15 119 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 IGHV3-66A0A0C4DH42 116 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 IGLC7A0M8Q6 106 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 ZNF503-AS2A6NEH8 195 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 PRSS47A8MTI9 375 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 CDKN1BP46527 198 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 ZNF833PQ6ZTB9 187 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 TMEM105Q8N8V8 129 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 DLX4Q92988 240 aaPredicted RBP8.39□□□□□ -1.07
PTPRM-205ENST00000577827 TMEM14CQ9P0S9 112 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 BVES-AS1Q5T3Y7 98 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 Q6ZR03 302 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 Q8TCH9 128 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 SIVA1O15304 175 aa8.39□□□□□ -1.07
PTPRM-205ENST00000577827 C17orf58Q2M2W7 97 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 THAP8Q8NA92 274 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 TICRRQ7Z2Z1 1910 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 LY6G6EA0A0G2JKS1 128 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 PPIFP30405 207 aaKnown RBP8.38□□□□□ -1.07
PTPRM-205ENST00000577827 ZNF562Q6V9R5 426 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 LINC00311Q8N616 119 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 TMEM158Q8WZ71 300 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 U3KQA8 63 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 INTS1Q8N201 2190 aaKnown RBP8.38□□□□□ -1.07
PTPRM-205ENST00000577827 ZNF318Q5VUA4 2279 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 IGHV3OR16-8A0A075B7F1 116 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 CD59P13987 128 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 LINC01560Q8TB33 94 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 RAX2Q96IS3 184 aa8.38□□□□□ -1.07
PTPRM-205ENST00000577827 ANAPC13Q9BS18 74 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms