RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TCF24Q7RTU0 167 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 ATOH7Q8N100 152 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 PNKDQ8N490 385 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 PRSS33Q8NF86 280 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 OR4A5Q8NH83 315 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 BORCS7Q96B45 105 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 BMPR1BO00238 502 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 TCAPO15273 167 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 IGLV2-23P01705 113 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 IGLV2-8P01709 118 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 ZNF137PP52743 207 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 ARF6P62330 175 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 MMDQ15546 238 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 ZNF329Q86UD4 541 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 MUC15Q8N387 334 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 KIR3DL3Q8N743 410 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 RCHY1Q96PM5 261 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 TPPP3Q9BW30 176 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 CLEC7AQ9BXN2 247 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 NRN1Q9NPD7 142 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 ARL2-SNX15V9GYD0 113 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 ZFHX4Q86UP3 3567 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 IGKV1D-37A0A075B6S9 117 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 IGLC7A0M8Q6 106 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 IZUMO1RA6ND01 250 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 HIGD1CA8MV81 97 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 SHISA9B4DS77 424 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 HIST1H1EP10412 219 aaKnown RBP4.26□□□□□ -1.73
VAPA-203ENST00000577539 LINC00310P59036 64 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 COX19Q49B96 90 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 RUSC1-AS1Q66K80 236 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 PPP1R27Q86WC6 154 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 STXBP6Q8NFX7 210 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 FXYD5Q96DB9 178 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 WWC2-AS2Q96NR7 200 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 PEMTQ9UBM1 199 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 EPDR1Q9UM22 224 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 RNF24Q9Y225 148 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 ADGRG4Q8IZF6 3080 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 TRAV8-1A0A0A6YYK1 113 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 IGHV1-3A0A0C4DH29 117 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 FOXA3P55318 350 aaPredicted RBP4.26□□□□□ -1.73
VAPA-203ENST00000577539 SLAQ13239 276 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 LINC00311Q8N616 119 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 NUP35Q8NFH5 326 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 SRSF12Q8WXF0 261 aaKnown RBP4.26□□□□□ -1.73
VAPA-203ENST00000577539 SNHG12Q9BXW3 62 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 VCX2Q9H322 139 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 HIGD1AQ9Y241 93 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 SIGLEC9Q9Y336 463 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 P01737 135 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 GPX1P07203 203 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 Q0VG73 95 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 Q5PR19 223 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 PRNTQ86SH4 94 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 TEX45Q8NA69 505 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 PGLYRP4Q96LB8 373 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 IGF2BP2-AS1Q96M15 143 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 RASL11BQ9BPW5 248 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 C2orf88Q9BSF0 95 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 CHRDL1Q9BU40 450 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 Q9H3A6 140 aa4.26□□□□□ -1.73
VAPA-203ENST00000577539 A0A1W2PS18 150 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 PSMB11A5LHX3 300 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 CCL21O00585 134 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 PSG1P11464 419 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 KLF17Q5JT82 389 aaPredicted RBP4.25□□□□□ -1.73
VAPA-203ENST00000577539 GOLT1AQ6ZVE7 132 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 OR8B3Q8NGG8 313 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 GRAMD2BQ96HH9 432 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 OR8B2Q96RD0 313 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 LAMA5O15230 3695 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 SMIM27A0A1W2PRY6 76 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 BUB1B-PAK6H3BSN5 160 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 M0R2Z0 102 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 TIMM23O14925 209 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 ZNF324O75467 553 aaPredicted RBP4.25□□□□□ -1.73
VAPA-203ENST00000577539 TPTE2P1Q5T6R2 138 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 LCN12Q6JVE5 192 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 EXOC3-AS1Q8N2X6 119 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 THAP8Q8NA92 274 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 KCNS1Q96KK3 526 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 GPR82Q96P67 336 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 CBY1Q9Y3M2 126 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 RNF114Q9Y508 228 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 NCOR2Q9Y618 2525 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 DMXL2Q8TDJ6 3036 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 NCBP2LA6PVI3 153 aaKnown RBP4.25□□□□□ -1.73
VAPA-203ENST00000577539 H0Y8G0 127 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 COMPP49747 757 aaPredicted RBP4.25□□□□□ -1.73
VAPA-203ENST00000577539 DLX6P56179 175 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 ZNF672Q499Z4 452 aaPredicted RBP4.25□□□□□ -1.73
VAPA-203ENST00000577539 Q56UQ5 140 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 FAM71F2Q6NXP2 309 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 C5orf17Q8NAS9 161 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 ZNF596Q8TC21 504 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 TRGV9Q99603 122 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 KAAG1Q9UBP8 84 aa4.25□□□□□ -1.73
VAPA-203ENST00000577539 A8MWL6 223 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 M0QZ24 198 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms