RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 TRAV1-1A0A0B4J248 108 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 F8W735 103 aaPredicted RBP6.59□□□□□ -1.35
PRPF8-213ENST00000576407 PHOX2AO14813 284 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 TRBV12-3P01733 135 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 CLEC3BP05452 202 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 RD3LP0DJH9 198 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 RPL12P30050 165 aaKnown RBP6.59□□□□□ -1.35
PRPF8-213ENST00000576407 MFAP4P55083 255 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 FAM3BP58499 235 aaPredicted RBP6.59□□□□□ -1.35
PRPF8-213ENST00000576407 RUNX1Q01196 453 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 EWSR1Q01844 656 aaKnown RBP eCLIP6.59□□□□□ -1.35
PRPF8-213ENST00000576407 Q56UQ5 140 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 ZNF506Q5JVG8 444 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 ACSM6Q6P461 480 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 SHISA2Q6UWI4 295 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 CLEC19AQ6UXS0 136 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 C8orf86Q6ZUL3 223 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 TMEM217Q8N7C4 229 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 TMEM116Q8NCL8 245 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 CACNG8Q8WXS5 425 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 ISOC2Q96AB3 205 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 PYGO2Q9BRQ0 406 aa6.59□□□□□ -1.35
PRPF8-213ENST00000576407 PEF1Q9UBV8 284 aaKnown RBP6.59□□□□□ -1.35
PRPF8-213ENST00000576407 OR2T8A6NH00 312 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 C9JQL5 133 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 H3BQ15 152 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
PRPF8-213ENST00000576407 TRGC1P0CF51 173 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 FCGR2BP31994 310 aaPredicted RBP6.58□□□□□ -1.36
PRPF8-213ENST00000576407 GPR183P32249 361 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 HBG1P69891 147 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 HBG2P69892 147 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 BAXQ07812 192 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 SLC38A11Q08AI6 406 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 DEFB136Q30KP8 78 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 LEMD1Q68G75 181 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 OR4X1Q8NH49 305 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 Q8WTZ3 238 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 NPIPB3Q92617 1050 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 GNPNAT1Q96EK6 184 aaPredicted RBP6.58□□□□□ -1.36
PRPF8-213ENST00000576407 SLC35E1Q96K37 410 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 DUX3Q96PT4 197 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 ATP6V0BQ99437 205 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 TXN2Q99757 166 aa6.58□□□□□ -1.36
PRPF8-213ENST00000576407 STAB1Q9NY15 2570 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 IGHV4OR15-8A0A075B7B6 117 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 A0A087WW49 117 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 RBFOX3A6NFN3 312 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 FNDC10F2Z333 226 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 BMPR1BO00238 502 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 EREGO14944 169 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 GNG7O60262 68 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 AMBPP02760 352 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 TYMSP04818 313 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 CTSGP08311 255 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 ADMP35318 185 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 ARL3P36405 182 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 SELENOTP62341 195 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 RPL7L1Q6DKI1 246 aaKnown RBP6.57□□□□□ -1.36
PRPF8-213ENST00000576407 SSX7Q7RTT5 188 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 OR11H1Q8NG94 326 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 OR5C1Q8NGR4 320 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 OR1N2Q8NGR9 330 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 RAX2Q96IS3 184 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 MIEN1Q9BRT3 115 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 CHRDL1Q9BU40 450 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 PRO1933Q9H354 126 aa6.57□□□□□ -1.36
PRPF8-213ENST00000576407 IGKV1OR2-108A0A075B7D4 117 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 LINC01619G3V211 115 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 CCL24O00175 119 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 TRGC2P03986 189 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 IGLC1P0CG04 106 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 CEBPGP53567 150 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 RBX1P62877 108 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 ZNF616Q08AN1 781 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 FHL3Q13643 280 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 ATP6V1FQ16864 119 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 TMEM183BQ1AE95 376 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 VWC2Q2TAL6 325 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 SPSB3Q6PJ21 355 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 TREML4Q6UXN2 200 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 TMEM144Q7Z5S9 345 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 OR4F17Q8NGA8 305 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 DPF1Q92782 380 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 OR4F4Q96R69 305 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 TMEM147Q9BVK8 224 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 SMIM3Q9BZL3 60 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 NPVFQ9HCQ7 196 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 FBXL17Q9UF56 701 aa6.56□□□□□ -1.36
PRPF8-213ENST00000576407 IGKV1D-37A0A075B6S9 117 aa6.55□□□□□ -1.36
PRPF8-213ENST00000576407 TRAV30A0A087WSZ9 112 aa6.55□□□□□ -1.36
PRPF8-213ENST00000576407 IGHV3-35A0A0C4DH35 117 aa6.55□□□□□ -1.36
PRPF8-213ENST00000576407 UBE2L5PA0A1B0GUS4 154 aa6.55□□□□□ -1.36
PRPF8-213ENST00000576407 C20orf202A1L168 122 aa6.55□□□□□ -1.36
PRPF8-213ENST00000576407 ZFP92A6NM28 416 aa6.55□□□□□ -1.36
PRPF8-213ENST00000576407 SCGB2A1O75556 95 aa6.55□□□□□ -1.36
PRPF8-213ENST00000576407 IGKV1-17P01599 117 aa6.55□□□□□ -1.36
PRPF8-213ENST00000576407 SRP19P09132 144 aaKnown RBP6.55□□□□□ -1.36
PRPF8-213ENST00000576407 HOXD3P31249 432 aaPredicted RBP6.55□□□□□ -1.36
PRPF8-213ENST00000576407 MYCNOSP40205 109 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms