RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 RPL7P18124 248 aaKnown RBP17.21■□□□□ 0.35
SNF8-217ENST00000576353 C16orf92Q96LL3 132 aa17.21■□□□□ 0.35
SNF8-217ENST00000576353 ARV1Q9H2C2 271 aa17.21■□□□□ 0.35
SNF8-217ENST00000576353 NUTF2P61970 127 aaKnown RBP17.2■□□□□ 0.34
SNF8-217ENST00000576353 PATE2Q6UY27 113 aa17.2■□□□□ 0.34
SNF8-217ENST00000576353 Q6ZRG5 221 aa17.2■□□□□ 0.34
SNF8-217ENST00000576353 PPP1R1CQ8WVI7 109 aa17.2■□□□□ 0.34
SNF8-217ENST00000576353 UHRF2Q96PU4 802 aa17.2■□□□□ 0.34
SNF8-217ENST00000576353 RARRES2Q99969 163 aa17.2■□□□□ 0.34
SNF8-217ENST00000576353 ELOA3CA0A087WX78 387 aaPredicted RBP17.19■□□□□ 0.34
SNF8-217ENST00000576353 H3BMM0 161 aa17.19■□□□□ 0.34
SNF8-217ENST00000576353 COX7A2P2O60397 106 aa17.19■□□□□ 0.34
SNF8-217ENST00000576353 ATF4P18848 351 aaPredicted RBP17.19■□□□□ 0.34
SNF8-217ENST00000576353 ZFAND6Q6FIF0 208 aa17.19■□□□□ 0.34
SNF8-217ENST00000576353 OR5AC2Q9NZP5 309 aa17.19■□□□□ 0.34
SNF8-217ENST00000576353 A0A0J9YWU9 116 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 UBE2L5PA0A1B0GUS4 154 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 H0YIZ8 118 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 PET100P0DJ07 73 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 HLA-DRB4P13762 266 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 BAXQ07812 192 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 SPATA31B1PQ5VZV4 182 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 FOXI2Q6ZQN5 318 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 OR11H2Q8NH07 326 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 HLA-DRB4X5D2U9 266 aa17.18■□□□□ 0.34
SNF8-217ENST00000576353 MPDU1O75352 247 aa17.17■□□□□ 0.34
SNF8-217ENST00000576353 GIG44P09565 113 aaPredicted RBP17.17■□□□□ 0.34
SNF8-217ENST00000576353 EWSR1Q01844 656 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNF8-217ENST00000576353 NHLH2Q02577 135 aa17.17■□□□□ 0.34
SNF8-217ENST00000576353 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.17■□□□□ 0.34
SNF8-217ENST00000576353 LINC00305Q7Z4B0 112 aa17.17■□□□□ 0.34
SNF8-217ENST00000576353 CHAC2Q8WUX2 184 aa17.17■□□□□ 0.34
SNF8-217ENST00000576353 C17orf77Q96MU5 243 aa17.17■□□□□ 0.34
SNF8-217ENST00000576353 SAV1Q9H4B6 383 aaPredicted RBP17.17■□□□□ 0.34
SNF8-217ENST00000576353 RPRMQ9NS64 109 aa17.17■□□□□ 0.34
SNF8-217ENST00000576353 ALG5Q9Y673 324 aa17.17■□□□□ 0.34
SNF8-217ENST00000576353 RPL29P47914 159 aaKnown RBP17.16■□□□□ 0.34
SNF8-217ENST00000576353 PRR20EP86478 221 aa17.16■□□□□ 0.34
SNF8-217ENST00000576353 PRR20CP86479 221 aa17.16■□□□□ 0.34
SNF8-217ENST00000576353 PRR20DP86480 221 aa17.16■□□□□ 0.34
SNF8-217ENST00000576353 PRR20BP86481 221 aa17.16■□□□□ 0.34
SNF8-217ENST00000576353 PRR20AP86496 221 aa17.16■□□□□ 0.34
SNF8-217ENST00000576353 C10orf113Q5VZT2 155 aa17.16■□□□□ 0.34
SNF8-217ENST00000576353 EBLN2Q6P2I7 272 aa17.16■□□□□ 0.34
SNF8-217ENST00000576353 C1QTNF4Q9BXJ3 329 aa17.16■□□□□ 0.34
SNF8-217ENST00000576353 DNAJC4Q9NNZ3 241 aa17.16■□□□□ 0.34
SNF8-217ENST00000576353 MPC2O95563 127 aa17.15■□□□□ 0.34
SNF8-217ENST00000576353 FGF7P21781 194 aa17.15■□□□□ 0.34
SNF8-217ENST00000576353 FGL1Q08830 312 aa17.15■□□□□ 0.34
SNF8-217ENST00000576353 MIC13Q5XKP0 118 aa17.15■□□□□ 0.34
SNF8-217ENST00000576353 OR5C1Q8NGR4 320 aa17.15■□□□□ 0.34
SNF8-217ENST00000576353 OR1L4Q8NGR5 311 aa17.15■□□□□ 0.34
SNF8-217ENST00000576353 TMEM37Q8WXS4 190 aa17.15■□□□□ 0.34
SNF8-217ENST00000576353 RNF126Q9BV68 326 aa17.15■□□□□ 0.34
SNF8-217ENST00000576353 C4BPBP20851 252 aa17.14■□□□□ 0.33
SNF8-217ENST00000576353 OPCMLQ14982 345 aa17.14■□□□□ 0.33
SNF8-217ENST00000576353 CLUHP3Q96NS8 147 aa17.14■□□□□ 0.33
SNF8-217ENST00000576353 PFDN5Q99471 154 aa17.14■□□□□ 0.33
SNF8-217ENST00000576353 SLC39A9Q9NUM3 307 aa17.14■□□□□ 0.33
SNF8-217ENST00000576353 A0A087X0K7 114 aa17.13■□□□□ 0.33
SNF8-217ENST00000576353 B2MP61769 119 aa17.13■□□□□ 0.33
SNF8-217ENST00000576353 GDF5OSQ5U4N7 250 aa17.13■□□□□ 0.33
SNF8-217ENST00000576353 DEFB1P60022 68 aa17.12■□□□□ 0.33
SNF8-217ENST00000576353 BPIFA4PQ86YQ2 179 aa17.12■□□□□ 0.33
SNF8-217ENST00000576353 OR4B1Q8NGF8 309 aa17.12■□□□□ 0.33
SNF8-217ENST00000576353 LRRC20Q8TCA0 184 aa17.12■□□□□ 0.33
SNF8-217ENST00000576353 C20orf173Q96LM9 149 aa17.12■□□□□ 0.33
SNF8-217ENST00000576353 PXMP4Q9Y6I8 212 aa17.12■□□□□ 0.33
SNF8-217ENST00000576353 AGRNO00468 2067 aa17.12■□□□□ 0.33
SNF8-217ENST00000576353 A0A0J9YX75 114 aa17.11■□□□□ 0.33
SNF8-217ENST00000576353 CLINT1Q14677 625 aa17.11■□□□□ 0.33
SNF8-217ENST00000576353 CSNK1G2-AS1Q8NCQ2 148 aa17.11■□□□□ 0.33
SNF8-217ENST00000576353 NPCDR1Q9BY65 106 aa17.11■□□□□ 0.33
SNF8-217ENST00000576353 MED28Q9H204 178 aa17.11■□□□□ 0.33
SNF8-217ENST00000576353 CLEC5AQ9NY25 188 aa17.11■□□□□ 0.33
SNF8-217ENST00000576353 TRAV8-2A0A0B4J237 113 aa17.1■□□□□ 0.33
SNF8-217ENST00000576353 MRPS12O15235 138 aaKnown RBP17.1■□□□□ 0.33
SNF8-217ENST00000576353 IGKV3-20P01619 116 aa17.1■□□□□ 0.33
SNF8-217ENST00000576353 FAM78BQ5VT40 261 aa17.1■□□□□ 0.33
SNF8-217ENST00000576353 THAP6Q8TBB0 222 aa17.1■□□□□ 0.33
SNF8-217ENST00000576353 C11orf68Q9H3H3 251 aaKnown RBP17.1■□□□□ 0.33
SNF8-217ENST00000576353 XCL2Q9UBD3 114 aa17.1■□□□□ 0.33
SNF8-217ENST00000576353 F6UB75 175 aa17.09■□□□□ 0.33
SNF8-217ENST00000576353 CXCL2P19875 107 aa17.09■□□□□ 0.33
SNF8-217ENST00000576353 CXCL3P19876 107 aa17.09■□□□□ 0.33
SNF8-217ENST00000576353 RPL12P30050 165 aaKnown RBP17.09■□□□□ 0.33
SNF8-217ENST00000576353 PSG9Q00887 426 aa17.09■□□□□ 0.33
SNF8-217ENST00000576353 IGFL4Q6B9Z1 124 aa17.09■□□□□ 0.33
SNF8-217ENST00000576353 RNF182Q8N6D2 247 aa17.09■□□□□ 0.33
SNF8-217ENST00000576353 MBD2Q9UBB5 411 aa17.09■□□□□ 0.33
SNF8-217ENST00000576353 DNAH7Q8WXX0 4024 aa17.09■□□□□ 0.33
SNF8-217ENST00000576353 ZNF705EA8MWA4 302 aaPredicted RBP17.08■□□□□ 0.32
SNF8-217ENST00000576353 RGS21Q2M5E4 152 aa17.08■□□□□ 0.32
SNF8-217ENST00000576353 MORN5Q5VZ52 161 aa17.08■□□□□ 0.32
SNF8-217ENST00000576353 LCN15Q6UWW0 184 aa17.08■□□□□ 0.32
SNF8-217ENST00000576353 ZNF709Q8N972 641 aa17.08■□□□□ 0.32
SNF8-217ENST00000576353 ZNF738Q8NE65 137 aa17.08■□□□□ 0.32
SNF8-217ENST00000576353 KCNIP2Q9NS61 270 aa17.08■□□□□ 0.32
SNF8-217ENST00000576353 HSPB11Q9Y547 144 aa17.08■□□□□ 0.32
SNF8-217ENST00000576353 DUSP14O95147 198 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms