RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 LEMD1Q68G75 181 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 PATE2Q6UY27 113 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 LINC00305Q7Z4B0 112 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 STHQ8IWL8 128 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 FAM24BQ8N5W8 94 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 SCGB1C1Q8TD33 95 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 UHRF2Q96PU4 802 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 ATP5SQ99766 215 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 SCRT1Q9BWW7 348 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 SMIM3Q9BZL3 60 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 KCNIP2Q9NS61 270 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 SLC39A9Q9NUM3 307 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 AGRNO00468 2067 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
LITAF-217ENST00000575426 PRR20EP86478 221 aa11.27□□□□□ -0.61
LITAF-217ENST00000575426 PRR20CP86479 221 aa11.27□□□□□ -0.61
LITAF-217ENST00000575426 PRR20DP86480 221 aa11.27□□□□□ -0.61
LITAF-217ENST00000575426 PRR20BP86481 221 aa11.27□□□□□ -0.61
LITAF-217ENST00000575426 PRR20AP86496 221 aa11.27□□□□□ -0.61
LITAF-217ENST00000575426 ZNF124Q15973 351 aa11.27□□□□□ -0.61
LITAF-217ENST00000575426 PSMG4Q5JS54 123 aa11.27□□□□□ -0.61
LITAF-217ENST00000575426 TM2D3Q9BRN9 247 aa11.27□□□□□ -0.61
LITAF-217ENST00000575426 WDR61Q9GZS3 305 aaKnown RBP11.27□□□□□ -0.61
LITAF-217ENST00000575426 INO80EQ8NBZ0 244 aaPredicted RBP11.26□□□□□ -0.61
LITAF-217ENST00000575426 OR2T35Q8NGX2 323 aa11.26□□□□□ -0.61
LITAF-217ENST00000575426 TMEM37Q8WXS4 190 aa11.26□□□□□ -0.61
LITAF-217ENST00000575426 C16orf92Q96LL3 132 aa11.26□□□□□ -0.61
LITAF-217ENST00000575426 LINC00052Q96N35 136 aa11.26□□□□□ -0.61
LITAF-217ENST00000575426 RCHY1Q96PM5 261 aa11.26□□□□□ -0.61
LITAF-217ENST00000575426 UBE2CO00762 179 aa11.25□□□□□ -0.61
LITAF-217ENST00000575426 PSMB3P49720 205 aa11.25□□□□□ -0.61
LITAF-217ENST00000575426 BPIFA4PQ86YQ2 179 aa11.25□□□□□ -0.61
LITAF-217ENST00000575426 LRRC20Q8TCA0 184 aa11.25□□□□□ -0.61
LITAF-217ENST00000575426 GATAD1Q8WUU5 269 aa11.25□□□□□ -0.61
LITAF-217ENST00000575426 FXYD6-FXYD2A0A087WZ82 144 aa11.24□□□□□ -0.61
LITAF-217ENST00000575426 KIR2DL5BA0A0G2JN68 375 aa11.24□□□□□ -0.61
LITAF-217ENST00000575426 KIR2DL5BA0A0G2JPC4 375 aa11.24□□□□□ -0.61
LITAF-217ENST00000575426 ISLRO14498 428 aa11.24□□□□□ -0.61
LITAF-217ENST00000575426 KIR2DL5AQ8N109 375 aa11.24□□□□□ -0.61
LITAF-217ENST00000575426 KIR2DL5BQ8NHK3 375 aa11.24□□□□□ -0.61
LITAF-217ENST00000575426 CSTL1Q9H114 145 aa11.24□□□□□ -0.61
LITAF-217ENST00000575426 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
LITAF-217ENST00000575426 Q5BKY6 102 aa11.23□□□□□ -0.61
LITAF-217ENST00000575426 ACTL10Q5JWF8 245 aa11.23□□□□□ -0.61
LITAF-217ENST00000575426 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.23□□□□□ -0.61
LITAF-217ENST00000575426 AQP10Q96PS8 301 aa11.23□□□□□ -0.61
LITAF-217ENST00000575426 ZNF266Q14584 549 aa11.22□□□□□ -0.61
LITAF-217ENST00000575426 PARD6GQ9BYG4 376 aaPredicted RBP11.22□□□□□ -0.61
LITAF-217ENST00000575426 RPRMQ9NS64 109 aa11.22□□□□□ -0.61
LITAF-217ENST00000575426 A0A087X0K7 114 aa11.21□□□□□ -0.61
LITAF-217ENST00000575426 SOCS3O14543 225 aa11.21□□□□□ -0.61
LITAF-217ENST00000575426 FAM78BQ5VT40 261 aa11.21□□□□□ -0.61
LITAF-217ENST00000575426 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.61
LITAF-217ENST00000575426 MORN3Q6PF18 240 aaPredicted RBP11.21□□□□□ -0.61
LITAF-217ENST00000575426 Q6ZWC4 215 aa11.21□□□□□ -0.61
LITAF-217ENST00000575426 WFDC1Q9HC57 220 aa11.21□□□□□ -0.61
LITAF-217ENST00000575426 RETNQ9HD89 108 aa11.21□□□□□ -0.61
LITAF-217ENST00000575426 SPP1P10451 314 aa11.2□□□□□ -0.62
LITAF-217ENST00000575426 FFAR4Q5NUL3 377 aa11.2□□□□□ -0.62
LITAF-217ENST00000575426 MORN5Q5VZ52 161 aa11.2□□□□□ -0.62
LITAF-217ENST00000575426 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
LITAF-217ENST00000575426 LCN15Q6UWW0 184 aa11.2□□□□□ -0.62
LITAF-217ENST00000575426 TRPT1Q86TN4 253 aaKnown RBP11.2□□□□□ -0.62
LITAF-217ENST00000575426 WWC2-AS2Q96NR7 200 aa11.2□□□□□ -0.62
LITAF-217ENST00000575426 TNFSF18Q9UNG2 199 aa11.2□□□□□ -0.62
LITAF-217ENST00000575426 NBEAL2Q6ZNJ1 2754 aa11.2□□□□□ -0.62
LITAF-217ENST00000575426 BORCS7-ASMTA0A0B4J1R7 106 aa11.19□□□□□ -0.62
LITAF-217ENST00000575426 TRAV5A0A0B4J249 113 aa11.19□□□□□ -0.62
LITAF-217ENST00000575426 SPRY2O43597 315 aa11.19□□□□□ -0.62
LITAF-217ENST00000575426 CA1P00915 261 aaPredicted RBP11.19□□□□□ -0.62
LITAF-217ENST00000575426 CXCL2P19875 107 aa11.19□□□□□ -0.62
LITAF-217ENST00000575426 NUTF2P61970 127 aaKnown RBP11.19□□□□□ -0.62
LITAF-217ENST00000575426 DEFB135Q30KP9 77 aa11.19□□□□□ -0.62
LITAF-217ENST00000575426 TMEM41BQ5BJD5 291 aa11.19□□□□□ -0.62
LITAF-217ENST00000575426 FOXI2Q6ZQN5 318 aa11.19□□□□□ -0.62
LITAF-217ENST00000575426 SLC50A1Q9BRV3 221 aa11.19□□□□□ -0.62
LITAF-217ENST00000575426 MRPL32Q9BYC8 188 aaKnown RBP11.19□□□□□ -0.62
LITAF-217ENST00000575426 SAV1Q9H4B6 383 aaPredicted RBP11.19□□□□□ -0.62
LITAF-217ENST00000575426 TP53TG1Q9Y2A0 90 aa11.19□□□□□ -0.62
LITAF-217ENST00000575426 H3BMM0 161 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
LITAF-217ENST00000575426 HLA-DRB4P13762 266 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 GUK1Q16774 197 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 ACOT6Q3I5F7 207 aaPredicted RBP11.18□□□□□ -0.62
LITAF-217ENST00000575426 GCSAMLQ5JQS6 135 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 ZNF738Q8NE65 137 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 OR4B1Q8NGF8 309 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 C17orf77Q96MU5 243 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 OVOL2Q9BRP0 275 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 HRH4Q9H3N8 390 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 TIMM9Q9Y5J7 89 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 HLA-DRB4X5D2U9 266 aa11.18□□□□□ -0.62
LITAF-217ENST00000575426 RNF222A6NCQ9 220 aa11.17□□□□□ -0.62
LITAF-217ENST00000575426 ARPC5O15511 151 aa11.17□□□□□ -0.62
LITAF-217ENST00000575426 SNRPCP09234 159 aaKnown RBP11.17□□□□□ -0.62
LITAF-217ENST00000575426 RHOBP62745 196 aa11.17□□□□□ -0.62
LITAF-217ENST00000575426 IGFL4Q6B9Z1 124 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms