RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CCL24O00175 119 aa18.37■□□□□ 0.53
ATPAF1-213ENST00000574428 APOHP02749 345 aaPredicted RBP18.36■□□□□ 0.53
ATPAF1-213ENST00000574428 HAGHQ16775 308 aa18.36■□□□□ 0.53
ATPAF1-213ENST00000574428 TM4SF20Q53R12 229 aa18.36■□□□□ 0.53
ATPAF1-213ENST00000574428 CITED1Q99966 193 aa18.36■□□□□ 0.53
ATPAF1-213ENST00000574428 SLC25A2Q9BXI2 301 aa18.36■□□□□ 0.53
ATPAF1-213ENST00000574428 TECRQ9NZ01 308 aaKnown RBP18.36■□□□□ 0.53
ATPAF1-213ENST00000574428 IGHV3OR16-13A0A075B7E8 117 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 IGHV3-74A0A0B4J1X5 117 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 STAG3L2P0CL84 134 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 STAG3L3P0CL85 134 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 C8orf88P0DMB2 117 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 NPPCP23582 126 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 FHL3Q13643 280 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 KLF5Q13887 457 aaPredicted RBP18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 C1QL4Q86Z23 238 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 FAM167A-AS1Q96KT0 104 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 IGHV3-66A0A0C4DH42 116 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 ZNF98A6NK75 572 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 ARL14EPLP0DKL9 152 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 CRYBB3P26998 211 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 SVBPQ8N300 66 aa18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 DAZ1Q9NQZ3 744 aaKnown RBP18.35■□□□□ 0.53
ATPAF1-213ENST00000574428 EDN2P20800 178 aa18.34■□□□□ 0.53
ATPAF1-213ENST00000574428 TAS2R45P59539 299 aa18.34■□□□□ 0.53
ATPAF1-213ENST00000574428 ICAM4Q14773 271 aa18.34■□□□□ 0.53
ATPAF1-213ENST00000574428 ZNF506Q5JVG8 444 aa18.34■□□□□ 0.53
ATPAF1-213ENST00000574428 REC114Q7Z4M0 266 aa18.34■□□□□ 0.53
ATPAF1-213ENST00000574428 TMEM158Q8WZ71 300 aa18.34■□□□□ 0.53
ATPAF1-213ENST00000574428 SMDT1Q9H4I9 107 aa18.34■□□□□ 0.53
ATPAF1-213ENST00000574428 GNG13Q9P2W3 67 aa18.34■□□□□ 0.53
ATPAF1-213ENST00000574428 UFC1Q9Y3C8 167 aa18.34■□□□□ 0.53
ATPAF1-213ENST00000574428 OR7C2O60412 319 aa18.33■□□□□ 0.53
ATPAF1-213ENST00000574428 KHDC3LQ587J8 217 aa18.33■□□□□ 0.53
ATPAF1-213ENST00000574428 S100A7AQ86SG5 101 aa18.33■□□□□ 0.53
ATPAF1-213ENST00000574428 LURAP1LQ8IV03 231 aa18.33■□□□□ 0.53
ATPAF1-213ENST00000574428 IQCF2Q8IXL9 164 aa18.33■□□□□ 0.53
ATPAF1-213ENST00000574428 DLX4Q92988 240 aaPredicted RBP18.33■□□□□ 0.53
ATPAF1-213ENST00000574428 TMPRSS5Q9H3S3 457 aa18.33■□□□□ 0.53
ATPAF1-213ENST00000574428 LGALS9O00182 355 aa18.32■□□□□ 0.52
ATPAF1-213ENST00000574428 ZNF503Q96F45 646 aa18.32■□□□□ 0.52
ATPAF1-213ENST00000574428 SLC35B3Q9H1N7 401 aa18.32■□□□□ 0.52
ATPAF1-213ENST00000574428 LOC102723971A0A1B0GUV8 181 aa18.32■□□□□ 0.52
ATPAF1-213ENST00000574428 TMEM213A2RRL7 107 aa18.32■□□□□ 0.52
ATPAF1-213ENST00000574428 CXorf1O96002 111 aa18.32■□□□□ 0.52
ATPAF1-213ENST00000574428 PYYP10082 97 aa18.32■□□□□ 0.52
ATPAF1-213ENST00000574428 NKX6-2Q9C056 277 aaPredicted RBP18.32■□□□□ 0.52
ATPAF1-213ENST00000574428 U3KQE9 123 aa18.32■□□□□ 0.52
ATPAF1-213ENST00000574428 A8MWP6 167 aa18.31■□□□□ 0.52
ATPAF1-213ENST00000574428 K7EMT4 169 aa18.31■□□□□ 0.52
ATPAF1-213ENST00000574428 RXFP4Q8TDU9 374 aa18.31■□□□□ 0.52
ATPAF1-213ENST00000574428 BUB3O43684 328 aa18.3■□□□□ 0.52
ATPAF1-213ENST00000574428 OR10J4P0C629 311 aa18.3■□□□□ 0.52
ATPAF1-213ENST00000574428 IGHV7-4-1A0A0J9YVY3 117 aa18.3■□□□□ 0.52
ATPAF1-213ENST00000574428 SNRPCP09234 159 aaKnown RBP18.3■□□□□ 0.52
ATPAF1-213ENST00000574428 BCL2P10415 239 aa18.3■□□□□ 0.52
ATPAF1-213ENST00000574428 GCHFRP30047 84 aa18.3■□□□□ 0.52
ATPAF1-213ENST00000574428 S100A7P31151 101 aa18.3■□□□□ 0.52
ATPAF1-213ENST00000574428 BTN1A1Q13410 526 aa18.3■□□□□ 0.52
ATPAF1-213ENST00000574428 PAXXQ9BUH6 204 aa18.3■□□□□ 0.52
ATPAF1-213ENST00000574428 SRP19P09132 144 aaKnown RBP18.29■□□□□ 0.52
ATPAF1-213ENST00000574428 GP9P14770 177 aa18.29■□□□□ 0.52
ATPAF1-213ENST00000574428 PQLC2Q6ZP29 291 aa18.29■□□□□ 0.52
ATPAF1-213ENST00000574428 OR8I2Q8N0Y5 310 aa18.29■□□□□ 0.52
ATPAF1-213ENST00000574428 OR51M1Q9H341 326 aa18.29■□□□□ 0.52
ATPAF1-213ENST00000574428 SNAPINO95295 136 aa18.28■□□□□ 0.52
ATPAF1-213ENST00000574428 MYCNOSP40205 109 aa18.28■□□□□ 0.52
ATPAF1-213ENST00000574428 UBE2L3P68036 154 aaKnown RBP18.28■□□□□ 0.52
ATPAF1-213ENST00000574428 SMPXQ9UHP9 88 aa18.28■□□□□ 0.52
ATPAF1-213ENST00000574428 SELENOKQ9Y6D0 94 aa18.28■□□□□ 0.52
ATPAF1-213ENST00000574428 PMS2P11Q13670 270 aa18.27■□□□□ 0.52
ATPAF1-213ENST00000574428 BPIFA4PQ86YQ2 179 aa18.27■□□□□ 0.52
ATPAF1-213ENST00000574428 OR9G4Q8NGQ1 327 aa18.27■□□□□ 0.52
ATPAF1-213ENST00000574428 RHPN1-AS1Q9BWJ2 59 aa18.27■□□□□ 0.52
ATPAF1-213ENST00000574428 C2orf70A6NJV1 201 aa18.27■□□□□ 0.51
ATPAF1-213ENST00000574428 IFNA1P01562 189 aa18.27■□□□□ 0.51
ATPAF1-213ENST00000574428 STXBP6Q8NFX7 210 aa18.27■□□□□ 0.51
ATPAF1-213ENST00000574428 FXYD5Q96DB9 178 aa18.27■□□□□ 0.51
ATPAF1-213ENST00000574428 ZNF747Q9BV97 191 aa18.27■□□□□ 0.51
ATPAF1-213ENST00000574428 TMEM14CQ9P0S9 112 aa18.27■□□□□ 0.51
ATPAF1-213ENST00000574428 CHEK1O14757 476 aa18.26■□□□□ 0.51
ATPAF1-213ENST00000574428 C1orf194Q5T5A4 169 aa18.26■□□□□ 0.51
ATPAF1-213ENST00000574428 C16orf54Q6UWD8 224 aa18.26■□□□□ 0.51
ATPAF1-213ENST00000574428 C12orf54Q6X4T0 127 aa18.26■□□□□ 0.51
ATPAF1-213ENST00000574428 C3orf56Q8N813 242 aa18.26■□□□□ 0.51
ATPAF1-213ENST00000574428 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.26■□□□□ 0.51
ATPAF1-213ENST00000574428 PEMTQ9UBM1 199 aa18.26■□□□□ 0.51
ATPAF1-213ENST00000574428 H3BTX0 84 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 MRPS12O15235 138 aaKnown RBP18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 RNF24Q9Y225 148 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 A0A1W2PS18 150 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 PF4P02776 101 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 RPL7P18124 248 aaKnown RBP18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 CBLN1P23435 193 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 CYB561D1Q8N8Q1 229 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 CLRN3Q8NCR9 226 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 GLMPQ8WWB7 406 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 GRAMD2BQ96HH9 432 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 ELOVL1Q9BW60 279 aa18.25■□□□□ 0.51
ATPAF1-213ENST00000574428 VAX2Q9UIW0 290 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms