RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 UBE2L5PA0A1B0GUS4 154 aa20.23■□□□□ 0.83
SCARF1-207ENST00000573867 ISLRO14498 428 aa20.23■□□□□ 0.83
SCARF1-207ENST00000573867 SPP1P10451 314 aa20.23■□□□□ 0.83
SCARF1-207ENST00000573867 HLA-DRB4P13762 266 aa20.23■□□□□ 0.83
SCARF1-207ENST00000573867 S100A11P31949 105 aa20.23■□□□□ 0.83
SCARF1-207ENST00000573867 ID1P41134 155 aa20.23■□□□□ 0.83
SCARF1-207ENST00000573867 MORN3Q6PF18 240 aaPredicted RBP20.23■□□□□ 0.83
SCARF1-207ENST00000573867 HLA-DRB4X5D2U9 266 aa20.23■□□□□ 0.83
SCARF1-207ENST00000573867 CAMLGP49069 296 aa20.22■□□□□ 0.83
SCARF1-207ENST00000573867 NHLH2Q02577 135 aa20.22■□□□□ 0.83
SCARF1-207ENST00000573867 MIC13Q5XKP0 118 aa20.22■□□□□ 0.83
SCARF1-207ENST00000573867 OR11H2Q8NH07 326 aa20.22■□□□□ 0.83
SCARF1-207ENST00000573867 PPP1R1CQ8WVI7 109 aa20.22■□□□□ 0.83
SCARF1-207ENST00000573867 TMEM37Q8WXS4 190 aa20.22■□□□□ 0.83
SCARF1-207ENST00000573867 GPR82Q96P67 336 aa20.22■□□□□ 0.83
SCARF1-207ENST00000573867 RARRES2Q99969 163 aa20.22■□□□□ 0.83
SCARF1-207ENST00000573867 ALG5Q9Y673 324 aa20.22■□□□□ 0.83
SCARF1-207ENST00000573867 E5RGE8 158 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 MRPS12O15235 138 aaKnown RBP20.21■□□□□ 0.83
SCARF1-207ENST00000573867 PTTG1O95997 202 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 MEOX2P50222 304 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 PRR20EP86478 221 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 PRR20CP86479 221 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 PRR20DP86480 221 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 PRR20BP86481 221 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 PRR20AP86496 221 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 CYCSP99999 105 aaKnown RBP20.21■□□□□ 0.83
SCARF1-207ENST00000573867 MORN5Q5VZ52 161 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 IL17DQ8TAD2 202 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 RNF126Q9BV68 326 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 SAV1Q9H4B6 383 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-207ENST00000573867 CLEC5AQ9NY25 188 aa20.21■□□□□ 0.83
SCARF1-207ENST00000573867 TENM2Q9NT68 2774 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 TRAV8-2A0A0B4J237 113 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 F6UB75 175 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 RLN2P04090 185 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 S100A7P31151 101 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 HBG1P69891 147 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 HBG2P69892 147 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 PXDC1Q5TGL8 231 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 IGFL4Q6B9Z1 124 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 C16orf92Q96LL3 132 aa20.2■□□□□ 0.82
SCARF1-207ENST00000573867 PLECQ15149 4684 aaKnown RBP20.19■□□□□ 0.82
SCARF1-207ENST00000573867 FOXI2Q6ZQN5 318 aa20.19■□□□□ 0.82
SCARF1-207ENST00000573867 LINC00305Q7Z4B0 112 aa20.19■□□□□ 0.82
SCARF1-207ENST00000573867 CSNK1G2-AS1Q8NCQ2 148 aa20.19■□□□□ 0.82
SCARF1-207ENST00000573867 RPL7P18124 248 aaKnown RBP20.18■□□□□ 0.82
SCARF1-207ENST00000573867 BAXQ07812 192 aa20.18■□□□□ 0.82
SCARF1-207ENST00000573867 OPCMLQ14982 345 aa20.18■□□□□ 0.82
SCARF1-207ENST00000573867 ATP6V1FQ16864 119 aa20.18■□□□□ 0.82
SCARF1-207ENST00000573867 LYSTQ99698 3801 aa20.17■□□□□ 0.82
SCARF1-207ENST00000573867 COX7A2P2O60397 106 aa20.17■□□□□ 0.82
SCARF1-207ENST00000573867 MPC2O95563 127 aa20.17■□□□□ 0.82
SCARF1-207ENST00000573867 IGKV3-20P01619 116 aa20.17■□□□□ 0.82
SCARF1-207ENST00000573867 FGF7P21781 194 aa20.17■□□□□ 0.82
SCARF1-207ENST00000573867 SAMD13Q5VXD3 122 aa20.17■□□□□ 0.82
SCARF1-207ENST00000573867 OR5C1Q8NGR4 320 aa20.17■□□□□ 0.82
SCARF1-207ENST00000573867 A0A087X0K7 114 aa20.16■□□□□ 0.82
SCARF1-207ENST00000573867 ATF4P18848 351 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-207ENST00000573867 CXCL3P19876 107 aa20.16■□□□□ 0.82
SCARF1-207ENST00000573867 FGL1Q08830 312 aa20.16■□□□□ 0.82
SCARF1-207ENST00000573867 RAB31Q13636 194 aa20.16■□□□□ 0.82
SCARF1-207ENST00000573867 TMEM41BQ5BJD5 291 aa20.16■□□□□ 0.82
SCARF1-207ENST00000573867 RNF182Q8N6D2 247 aa20.16■□□□□ 0.82
SCARF1-207ENST00000573867 CHAC2Q8WUX2 184 aa20.16■□□□□ 0.82
SCARF1-207ENST00000573867 SLC25A31Q9H0C2 315 aa20.16■□□□□ 0.82
SCARF1-207ENST00000573867 A0A0J9YX75 114 aa20.15■□□□□ 0.82
SCARF1-207ENST00000573867 RPL29P47914 159 aaKnown RBP20.15■□□□□ 0.82
SCARF1-207ENST00000573867 XCL2Q9UBD3 114 aa20.15■□□□□ 0.82
SCARF1-207ENST00000573867 X6R8D5 127 aa20.15■□□□□ 0.82
SCARF1-207ENST00000573867 DEFB4AO15263 64 aa20.14■□□□□ 0.81
SCARF1-207ENST00000573867 HLA-DMBP28068 263 aa20.14■□□□□ 0.81
SCARF1-207ENST00000573867 FXYD7P58549 80 aa20.14■□□□□ 0.81
SCARF1-207ENST00000573867 C10orf113Q5VZT2 155 aa20.14■□□□□ 0.81
SCARF1-207ENST00000573867 Q8NAQ8 132 aa20.14■□□□□ 0.81
SCARF1-207ENST00000573867 THAP6Q8TBB0 222 aa20.14■□□□□ 0.81
SCARF1-207ENST00000573867 RPRMQ9NS64 109 aa20.14■□□□□ 0.81
SCARF1-207ENST00000573867 SLC39A9Q9NUM3 307 aa20.14■□□□□ 0.81
SCARF1-207ENST00000573867 PXMP4Q9Y6I8 212 aa20.14■□□□□ 0.81
SCARF1-207ENST00000573867 RYR2Q92736 4967 aa20.13■□□□□ 0.81
SCARF1-207ENST00000573867 ELOA3CA0A087WX78 387 aaPredicted RBP20.13■□□□□ 0.81
SCARF1-207ENST00000573867 ZNF705EA8MWA4 302 aaPredicted RBP20.13■□□□□ 0.81
SCARF1-207ENST00000573867 SNRPCP09234 159 aaKnown RBP20.13■□□□□ 0.81
SCARF1-207ENST00000573867 B2MP61769 119 aa20.13■□□□□ 0.81
SCARF1-207ENST00000573867 CLINT1Q14677 625 aa20.13■□□□□ 0.81
SCARF1-207ENST00000573867 FAM78BQ5VT40 261 aa20.13■□□□□ 0.81
SCARF1-207ENST00000573867 S100A7AQ86SG5 101 aa20.13■□□□□ 0.81
SCARF1-207ENST00000573867 ZNF709Q8N972 641 aa20.13■□□□□ 0.81
SCARF1-207ENST00000573867 C11orf68Q9H3H3 251 aaKnown RBP20.13■□□□□ 0.81
SCARF1-207ENST00000573867 DNAJC4Q9NNZ3 241 aa20.13■□□□□ 0.81
SCARF1-207ENST00000573867 TRAV5A0A0B4J249 113 aa20.12■□□□□ 0.81
SCARF1-207ENST00000573867 PMS2P11Q13670 270 aa20.12■□□□□ 0.81
SCARF1-207ENST00000573867 Q6ZRG5 221 aa20.12■□□□□ 0.81
SCARF1-207ENST00000573867 OR4B1Q8NGF8 309 aa20.12■□□□□ 0.81
SCARF1-207ENST00000573867 CLUHP3Q96NS8 147 aa20.12■□□□□ 0.81
SCARF1-207ENST00000573867 NPCDR1Q9BY65 106 aa20.12■□□□□ 0.81
SCARF1-207ENST00000573867 SLC35B3Q9H1N7 401 aa20.12■□□□□ 0.81
SCARF1-207ENST00000573867 MBD2Q9UBB5 411 aa20.12■□□□□ 0.81
SCARF1-207ENST00000573867 OR11H7Q8NGC8 314 aa20.11■□□□□ 0.81
SCARF1-207ENST00000573867 A8MTW9 85 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms