RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 DEFB4AO15263 64 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 IGKV1-17P01599 117 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 IL4P05112 153 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 FABP1P07148 127 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 IGLC1P0CG04 106 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 HLA-DMBP28068 263 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 S100A5P33763 92 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 RND2P52198 227 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 ATP5IP56385 69 aaPredicted RBP6.69□□□□□ -1.34
CIITA-208ENST00000572665 IL18Q14116 193 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 ZNF79Q15937 498 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 PSMG4Q5JS54 123 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 FAM24BQ8N5W8 94 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 THAP6Q8TBB0 222 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 IL22RA2Q969J5 263 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 RNF126Q9BV68 326 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 FNDC4Q9H6D8 234 aaPredicted RBP6.69□□□□□ -1.34
CIITA-208ENST00000572665 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 CACNG5Q9UF02 275 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 U3KQ87 197 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 TEX48A0A1B0GUV7 120 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 TMEM189A5PLL7 270 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 KNCNA6PVL3 124 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 IFNA10P01566 189 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 AKAIN1P0CW23 69 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 RD3LP0DJH9 198 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 SULT1A3P0DMM9 295 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 SULT1A4P0DMN0 295 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 P0DMU3 169 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 FAM231AP0DMU4 169 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 FAM231CP0DMU5 169 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 ANXA3P12429 323 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 S100A7P31151 101 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 ID1P41134 155 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 SRPXP78539 464 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 CNPY1Q3B7I2 92 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 SAMD13Q5VXD3 122 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 PRSS54Q6PEW0 395 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 SIGLEC15Q6ZMC9 328 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 LINC00299Q6ZSB3 139 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 LINC00336Q6ZUF6 198 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 GLYATL2Q8WU03 294 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 RAB40CQ96S21 281 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 KRTAP17-1Q9BYP8 105 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 SCP2D1Q9UJQ7 156 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 APLNQ9ULZ1 77 aa6.68□□□□□ -1.34
CIITA-208ENST00000572665 AGRNO00468 2067 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 IGHV4-4A0A075B6R2 117 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 SMIM9A6NGZ8 99 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 CRYM-AS1A6NIL9 109 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 BUB3O43684 328 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 RBMY1A1P0DJD3 496 aaKnown RBP6.67□□□□□ -1.34
CIITA-208ENST00000572665 RBMY1CP0DJD4 496 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 C4BPBP20851 252 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 CCR6P51684 374 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 RBMY1FQ15415 496 aaKnown RBP6.67□□□□□ -1.34
CIITA-208ENST00000572665 SPANXN2Q5MJ10 180 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 SPATA31B1PQ5VZV4 182 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 SELENOHQ8IZQ5 122 aaKnown RBP6.67□□□□□ -1.34
CIITA-208ENST00000572665 OR4D10Q8NGI6 311 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 OR51G1Q8NGK1 321 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 NDUFAF3Q9BU61 184 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 MRPL36Q9P0J6 103 aaKnown RBP6.67□□□□□ -1.34
CIITA-208ENST00000572665 TMEM56-RWDD3S4R434 201 aa6.67□□□□□ -1.34
CIITA-208ENST00000572665 DEFB131BA0A096LNP1 70 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 A0A0G2JRQ6 117 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 ANKRD20A5PA0PJZ0 165 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 AMBPP02760 352 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 SPART-AS1P0CW21 52 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 AKR1C4P17516 323 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 NKX2-1P43699 371 aaPredicted RBP6.66□□□□□ -1.34
CIITA-208ENST00000572665 OR8G2PQ6IF36 304 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 Q6ZTC4 211 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 CSNK1G2-AS1Q8NCQ2 148 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 COQ8AQ8NI60 647 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 GPR146Q96CH1 333 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 ACY3Q96HD9 319 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 SLC35E1Q96K37 410 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 RTBDNQ9BSG5 229 aaPredicted RBP6.66□□□□□ -1.34
CIITA-208ENST00000572665 SRRQ9GZT4 340 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 PTTG2Q9NZH5 202 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 GPR132Q9UNW8 380 aa6.66□□□□□ -1.34
CIITA-208ENST00000572665 A0A0B4J2A0 478 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 ZFP92A6NM28 416 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 CFDP00746 253 aaPredicted RBP6.65□□□□□ -1.34
CIITA-208ENST00000572665 GIG44P09565 113 aaPredicted RBP6.65□□□□□ -1.34
CIITA-208ENST00000572665 HLA-DRB4P13762 266 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 FAUP35544 74 aaKnown RBP6.65□□□□□ -1.34
CIITA-208ENST00000572665 GPX4P36969 197 aaPredicted RBP6.65□□□□□ -1.34
CIITA-208ENST00000572665 RAB11AP62491 216 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 SMCO1Q147U7 214 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 USF2Q15853 346 aaPredicted RBP6.65□□□□□ -1.34
CIITA-208ENST00000572665 PYDC2Q56P42 97 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 NMSQ5H8A3 153 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 C1orf194Q5T5A4 169 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 LGI3Q8N145 548 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 OR4C16Q8NGL9 310 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 DTD1Q8TEA8 209 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 DEDD2Q8WXF8 326 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 PPP1R14BQ96C90 147 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms