RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 MFFQ9GZY8 342 aa15.42■□□□□ 0.06
VPS53-210ENST00000571456 TIMM9Q9Y5J7 89 aa15.42■□□□□ 0.06
VPS53-210ENST00000571456 BORCS7-ASMTA0A0B4J1R7 106 aa15.41■□□□□ 0.06
VPS53-210ENST00000571456 IGHV3-66A0A0C4DH42 116 aa15.41■□□□□ 0.06
VPS53-210ENST00000571456 DNASE2O00115 360 aaPredicted RBP15.41■□□□□ 0.06
VPS53-210ENST00000571456 RPL7P18124 248 aaKnown RBP15.41■□□□□ 0.06
VPS53-210ENST00000571456 GALR1P47211 349 aa15.41■□□□□ 0.06
VPS53-210ENST00000571456 MEOX2P50222 304 aa15.41■□□□□ 0.06
VPS53-210ENST00000571456 C10orf113Q5VZT2 155 aa15.41■□□□□ 0.06
VPS53-210ENST00000571456 A0A0D9SG52 128 aa15.4■□□□□ 0.06
VPS53-210ENST00000571456 CD81P60033 236 aa15.4■□□□□ 0.06
VPS53-210ENST00000571456 MS4A6AQ9H2W1 248 aa15.4■□□□□ 0.06
VPS53-210ENST00000571456 NRN1Q9NPD7 142 aa15.4■□□□□ 0.06
VPS53-210ENST00000571456 DOK5Q9P104 306 aa15.4■□□□□ 0.06
VPS53-210ENST00000571456 SMAD5-AS1Q9Y6J3 95 aa15.4■□□□□ 0.06
VPS53-210ENST00000571456 A8MZ25 164 aa15.39■□□□□ 0.05
VPS53-210ENST00000571456 JTBO76095 146 aa15.39■□□□□ 0.05
VPS53-210ENST00000571456 PATE2Q6UY27 113 aa15.39■□□□□ 0.05
VPS53-210ENST00000571456 LINC00305Q7Z4B0 112 aa15.39■□□□□ 0.05
VPS53-210ENST00000571456 PSMG3Q9BT73 122 aaPredicted RBP15.39■□□□□ 0.05
VPS53-210ENST00000571456 HYDINQ4G0P3 5121 aa15.38■□□□□ 0.05
VPS53-210ENST00000571456 Q8N1Y9 231 aa15.38■□□□□ 0.05
VPS53-210ENST00000571456 STXBP6Q8NFX7 210 aa15.38■□□□□ 0.05
VPS53-210ENST00000571456 TMEM37Q8WXS4 190 aa15.38■□□□□ 0.05
VPS53-210ENST00000571456 GNPNAT1Q96EK6 184 aaPredicted RBP15.38■□□□□ 0.05
VPS53-210ENST00000571456 WFDC1Q9HC57 220 aa15.38■□□□□ 0.05
VPS53-210ENST00000571456 CSMD3Q7Z407 3707 aa15.38■□□□□ 0.05
VPS53-210ENST00000571456 hCG_2014768A0A024R1R8 64 aa15.37■□□□□ 0.05
VPS53-210ENST00000571456 SERF2P84101 59 aa15.37■□□□□ 0.05
VPS53-210ENST00000571456 BPIFA4PQ86YQ2 179 aa15.37■□□□□ 0.05
VPS53-210ENST00000571456 KCNRGQ8N5I3 272 aa15.37■□□□□ 0.05
VPS53-210ENST00000571456 HYLS1Q96M11 299 aa15.37■□□□□ 0.05
VPS53-210ENST00000571456 MRPL32Q9BYC8 188 aaKnown RBP15.37■□□□□ 0.05
VPS53-210ENST00000571456 SLC25A22Q9H936 323 aa15.37■□□□□ 0.05
VPS53-210ENST00000571456 SMLR1H3BR10 107 aa15.36■□□□□ 0.05
VPS53-210ENST00000571456 K7EQG2 157 aa15.36■□□□□ 0.05
VPS53-210ENST00000571456 C1QBP02746 253 aa15.36■□□□□ 0.05
VPS53-210ENST00000571456 OR2G3Q8NGZ4 309 aa15.36■□□□□ 0.05
VPS53-210ENST00000571456 DCANP1Q8TF63 244 aa15.36■□□□□ 0.05
VPS53-210ENST00000571456 UHRF2Q96PU4 802 aa15.36■□□□□ 0.05
VPS53-210ENST00000571456 SCRT1Q9BWW7 348 aa15.36■□□□□ 0.05
VPS53-210ENST00000571456 OR11H12B2RN74 326 aa15.35■□□□□ 0.05
VPS53-210ENST00000571456 MBP02144 154 aa15.35■□□□□ 0.05
VPS53-210ENST00000571456 ID1P41134 155 aa15.35■□□□□ 0.05
VPS53-210ENST00000571456 SNRPD3P62318 126 aaKnown RBP15.35■□□□□ 0.05
VPS53-210ENST00000571456 EIF5AP63241 154 aaKnown RBP15.35■□□□□ 0.05
VPS53-210ENST00000571456 GBGT1Q8N5D6 347 aa15.35■□□□□ 0.05
VPS53-210ENST00000571456 OR11H4Q8NGC9 324 aa15.35■□□□□ 0.05
VPS53-210ENST00000571456 ARPC5LQ9BPX5 153 aa15.35■□□□□ 0.05
VPS53-210ENST00000571456 RSG1Q9BU20 258 aa15.35■□□□□ 0.05
VPS53-210ENST00000571456 SLC25A32Q9H2D1 315 aa15.35■□□□□ 0.05
VPS53-210ENST00000571456 IGKV3-7A0A075B6H7 116 aa15.34■□□□□ 0.05
VPS53-210ENST00000571456 KANTRA0A1W2PQU2 76 aa15.34■□□□□ 0.05
VPS53-210ENST00000571456 CD7P09564 240 aa15.34■□□□□ 0.05
VPS53-210ENST00000571456 ATF4P18848 351 aaPredicted RBP15.34■□□□□ 0.05
VPS53-210ENST00000571456 ACOT6Q3I5F7 207 aaPredicted RBP15.34■□□□□ 0.05
VPS53-210ENST00000571456 SELENOKQ9Y6D0 94 aa15.34■□□□□ 0.05
VPS53-210ENST00000571456 A0A087X0K7 114 aa15.33■□□□□ 0.04
VPS53-210ENST00000571456 ISLRO14498 428 aa15.33■□□□□ 0.04
VPS53-210ENST00000571456 CXCL2P19875 107 aa15.33■□□□□ 0.04
VPS53-210ENST00000571456 TFPI2P48307 235 aa15.33■□□□□ 0.04
VPS53-210ENST00000571456 FFAR4Q5NUL3 377 aa15.33■□□□□ 0.04
VPS53-210ENST00000571456 M6PRP20645 277 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 C4BPBP20851 252 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 PSMB3P49720 205 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 RHOBP62745 196 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 GUK1Q16774 197 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 ODF3L2Q3SX64 289 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 FAM78BQ5VT40 261 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 RPL7L1Q6DKI1 246 aaKnown RBP15.32■□□□□ 0.04
VPS53-210ENST00000571456 HSD17B11Q8NBQ5 300 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 TUBA4BQ9H853 241 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 C19orf73Q9NVV2 129 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 CLEC5AQ9NY25 188 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 TMEM14CQ9P0S9 112 aa15.32■□□□□ 0.04
VPS53-210ENST00000571456 IGHV4-30-4P0DP06 118 aa15.31■□□□□ 0.04
VPS53-210ENST00000571456 ATP6V0CP27449 155 aa15.31■□□□□ 0.04
VPS53-210ENST00000571456 TAS2R45P59539 299 aa15.31■□□□□ 0.04
VPS53-210ENST00000571456 LEMD1Q68G75 181 aa15.31■□□□□ 0.04
VPS53-210ENST00000571456 WFDC3Q8IUB2 231 aa15.31■□□□□ 0.04
VPS53-210ENST00000571456 MAP6D1Q9H9H5 199 aa15.31■□□□□ 0.04
VPS53-210ENST00000571456 FUT9Q9Y231 359 aa15.31■□□□□ 0.04
VPS53-210ENST00000571456 HUWE1Q7Z6Z7 4374 aaKnown RBP15.31■□□□□ 0.04
VPS53-210ENST00000571456 STARD9Q9P2P6 4700 aa15.3■□□□□ 0.04
VPS53-210ENST00000571456 BCL2L11O43521 198 aa15.3■□□□□ 0.04
VPS53-210ENST00000571456 PFDN1O60925 122 aa15.3■□□□□ 0.04
VPS53-210ENST00000571456 LCN15Q6UWW0 184 aa15.3■□□□□ 0.04
VPS53-210ENST00000571456 HRH4Q9H3N8 390 aa15.3■□□□□ 0.04
VPS53-210ENST00000571456 MRPS12O15235 138 aaKnown RBP15.29■□□□□ 0.04
VPS53-210ENST00000571456 SLC50A1Q9BRV3 221 aa15.29■□□□□ 0.04
VPS53-210ENST00000571456 CYTL1Q9NRR1 136 aa15.29■□□□□ 0.04
VPS53-210ENST00000571456 A0A1B0GVG6 124 aa15.28■□□□□ 0.04
VPS53-210ENST00000571456 A0A1W2PPV4 95 aa15.28■□□□□ 0.04
VPS53-210ENST00000571456 SOCS3O14543 225 aa15.28■□□□□ 0.04
VPS53-210ENST00000571456 ZNF253O75346 499 aa15.28■□□□□ 0.04
VPS53-210ENST00000571456 ZFP69Q49AA0 526 aa15.28■□□□□ 0.04
VPS53-210ENST00000571456 TMUB2Q71RG4 321 aa15.28■□□□□ 0.04
VPS53-210ENST00000571456 C16orf92Q96LL3 132 aa15.28■□□□□ 0.04
VPS53-210ENST00000571456 ASCL2Q99929 193 aa15.28■□□□□ 0.04
VPS53-210ENST00000571456 SRD5A3Q9H8P0 318 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms