RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 RSG1Q9BU20 258 aa5.14□□□□□ -1.59
SMG6-209ENST00000571442 WDR61Q9GZS3 305 aaKnown RBP5.14□□□□□ -1.59
SMG6-209ENST00000571442 SLC25A31Q9H0C2 315 aa5.14□□□□□ -1.59
SMG6-209ENST00000571442 NRN1Q9NPD7 142 aa5.14□□□□□ -1.59
SMG6-209ENST00000571442 SLC39A9Q9NUM3 307 aa5.14□□□□□ -1.59
SMG6-209ENST00000571442 HIGD1AQ9Y241 93 aa5.14□□□□□ -1.59
SMG6-209ENST00000571442 PXMP4Q9Y6I8 212 aa5.14□□□□□ -1.59
SMG6-209ENST00000571442 RYR3Q15413 4870 aa5.14□□□□□ -1.59
SMG6-209ENST00000571442 LOC102724200A0A096LPH7 203 aaPredicted RBP5.13□□□□□ -1.59
SMG6-209ENST00000571442 HELTA6NFD8 242 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 F6UB75 175 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 H3BTX0 84 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 CFDP00746 253 aaPredicted RBP5.13□□□□□ -1.59
SMG6-209ENST00000571442 CD5P06127 495 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 RPL29P47914 159 aaKnown RBP5.13□□□□□ -1.59
SMG6-209ENST00000571442 B2MP61769 119 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 PAFAH1B2P68402 229 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 HBG1P69891 147 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 HBG2P69892 147 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 ATP6V1FQ16864 119 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 PSMG4Q5JS54 123 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 LINC00305Q7Z4B0 112 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 OR11H4Q8NGC9 324 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 OR2T35Q8NGX2 323 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 RCHY1Q96PM5 261 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 ATP5SQ99766 215 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 FBXL17Q9UF56 701 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 U3KQK5 164 aa5.13□□□□□ -1.59
SMG6-209ENST00000571442 FXYD6-FXYD2A0A087WZ82 144 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 H3BQ15 152 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 SLC17A3O00476 420 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 COX7A2P2O60397 106 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 NHLRC4P0CG21 123 aaPredicted RBP5.12□□□□□ -1.59
SMG6-209ENST00000571442 PET100P0DJ07 73 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 C4BPBP20851 252 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 AP2S1P53680 142 aaPredicted RBP5.12□□□□□ -1.59
SMG6-209ENST00000571442 RAP2BP61225 183 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 ACTL10Q5JWF8 245 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 Q6ZNX1 250 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 TRPT1Q86TN4 253 aaKnown RBP5.12□□□□□ -1.59
SMG6-209ENST00000571442 RNF182Q8N6D2 247 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 AQP10Q96PS8 301 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 OVOL2Q9BRP0 275 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 TNFSF18Q9UNG2 199 aa5.12□□□□□ -1.59
SMG6-209ENST00000571442 A0A087X0K7 114 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 ZNF705DP0CH99 300 aaPredicted RBP5.11□□□□□ -1.59
SMG6-209ENST00000571442 ZNF705BP0CI00 300 aaPredicted RBP5.11□□□□□ -1.59
SMG6-209ENST00000571442 IGLC2P0DOY2 106 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 PYYP10082 97 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 NUP62P37198 522 aaPredicted RBP5.11□□□□□ -1.59
SMG6-209ENST00000571442 FGL1Q08830 312 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 DEFB135Q30KP9 77 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 PXDC1Q5TGL8 231 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 C10orf113Q5VZT2 155 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 MIR17HGQ75NE6 70 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 ZNF503Q96F45 646 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 FAM167A-AS1Q96KT0 104 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 LINC00052Q96N35 136 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 SPATA25Q9BR10 227 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 SLC25A2Q9BXI2 301 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 EDA2RQ9HAV5 297 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 SEPSECSQ9HD40 501 aaKnown RBP5.11□□□□□ -1.59
SMG6-209ENST00000571442 DNAJC4Q9NNZ3 241 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 ZNF586Q9NXT0 402 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 LYSTQ99698 3801 aa5.11□□□□□ -1.59
SMG6-209ENST00000571442 PLECQ15149 4684 aaKnown RBP5.11□□□□□ -1.59
SMG6-209ENST00000571442 ELOA3CA0A087WX78 387 aaPredicted RBP5.1□□□□□ -1.59
SMG6-209ENST00000571442 A0A1B0GVG6 124 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 H3BMM0 161 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 MPDU1O75352 247 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 NDUFB4O95168 129 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 IGKV3-20P01619 116 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 RPL7P18124 248 aaKnown RBP5.1□□□□□ -1.59
SMG6-209ENST00000571442 GALR1P47211 349 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 PSMB3P49720 205 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 FXYD7P58549 80 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 CD300CQ08708 224 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 RAB31Q13636 194 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 FAM78BQ5VT40 261 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 RPL7L1Q6DKI1 246 aaKnown RBP5.1□□□□□ -1.59
SMG6-209ENST00000571442 Q6ZRG5 221 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 SAT2Q96F10 170 aaPredicted RBP5.1□□□□□ -1.59
SMG6-209ENST00000571442 ST6GAL2Q96JF0 529 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 C16orf92Q96LL3 132 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 PARD6GQ9BYG4 376 aaPredicted RBP5.1□□□□□ -1.59
SMG6-209ENST00000571442 CSTL1Q9H114 145 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 SH3BGRL3Q9H299 93 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 SAV1Q9H4B6 383 aaPredicted RBP5.1□□□□□ -1.59
SMG6-209ENST00000571442 ZMAT4Q9H898 229 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 CYTL1Q9NRR1 136 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 CLEC5AQ9NY25 188 aa5.1□□□□□ -1.59
SMG6-209ENST00000571442 DYNC2H1Q8NCM8 4307 aaKnown RBP5.09□□□□□ -1.59
SMG6-209ENST00000571442 hCG_2014768A0A024R1R8 64 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 KIR2DL5BA0A0G2JN68 375 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 KIR2DL5BA0A0G2JPC4 375 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 ZNF705FA8MVS1 300 aaPredicted RBP5.09□□□□□ -1.59
SMG6-209ENST00000571442 PRAC2D3DTV9 90 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 ISLRO14498 428 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 ARPC5O15511 151 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 CA1P00915 261 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms