RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 Q6ZRG5 221 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 FAM110AQ9BQ89 295 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 NEURL2Q9BR09 285 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 SCRT1Q9BWW7 348 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 NPCDR1Q9BY65 106 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 MFFQ9GZY8 342 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 WFDC10AQ9H1F0 79 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 ARV1Q9H2C2 271 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 RETNQ9HD89 108 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 SLC39A9Q9NUM3 307 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 RFNGQ9Y644 331 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 RNF222A6NCQ9 220 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 OR4C46A6NHA9 309 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 ZNF98A6NK75 572 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 C17orf112F2Z3M2 114 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 MPDU1O75352 247 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 RPL29P47914 159 aaKnown RBP9.91□□□□□ -0.82
CCDC40-205ENST00000571028 C10orf113Q5VZT2 155 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 PATE2Q6UY27 113 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 SIGLEC15Q6ZMC9 328 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 HSD17B11Q8NBQ5 300 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 GLMPQ8WWB7 406 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 ST6GAL2Q96JF0 529 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 SPAG8Q99932 426 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-205ENST00000571028 SLC25A39Q9BZJ4 359 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-205ENST00000571028 MS4A6AQ9H2W1 248 aa9.91□□□□□ -0.82
CCDC40-205ENST00000571028 HELTA6NFD8 242 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 H3BRN7 92 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 S100A7P31151 101 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 PLP1P60201 277 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 PRR20EP86478 221 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 PRR20CP86479 221 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 PRR20DP86480 221 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 PRR20BP86481 221 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 PRR20AP86496 221 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 GCSAMLQ5JQS6 135 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 AKAP14Q86UN6 197 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 DEFB125Q8N687 156 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 OR11H4Q8NGC9 324 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 SHANK2-AS3Q9BTD1 123 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 DNAJC4Q9NNZ3 241 aa9.9□□□□□ -0.82
CCDC40-205ENST00000571028 PCLOQ9Y6V0 5065 aa9.89□□□□□ -0.83
CCDC40-205ENST00000571028 TRAV5A0A0B4J249 113 aa9.89□□□□□ -0.83
CCDC40-205ENST00000571028 CD5P06127 495 aa9.89□□□□□ -0.83
CCDC40-205ENST00000571028 SNRPCP09234 159 aaKnown RBP9.89□□□□□ -0.83
CCDC40-205ENST00000571028 FFAR4Q5NUL3 377 aa9.89□□□□□ -0.83
CCDC40-205ENST00000571028 PXDC1Q5TGL8 231 aa9.89□□□□□ -0.83
CCDC40-205ENST00000571028 LINC00305Q7Z4B0 112 aa9.89□□□□□ -0.83
CCDC40-205ENST00000571028 OR1L4Q8NGR5 311 aa9.89□□□□□ -0.83
CCDC40-205ENST00000571028 TMEM37Q8WXS4 190 aa9.89□□□□□ -0.83
CCDC40-205ENST00000571028 SLC25A32Q9H2D1 315 aa9.89□□□□□ -0.83
CCDC40-205ENST00000571028 PLECQ15149 4684 aaKnown RBP9.88□□□□□ -0.83
CCDC40-205ENST00000571028 ELOA3CA0A087WX78 387 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-205ENST00000571028 BORCS7-ASMTA0A0B4J1R7 106 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 OR11H12B2RN74 326 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 ZNF688P0C7X2 276 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 GALR1P47211 349 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 CD300CQ08708 224 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 ZNF266Q14584 549 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 C1orf194Q5T5A4 169 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 MORN5Q5VZ52 161 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 RPL7L1Q6DKI1 246 aaKnown RBP9.88□□□□□ -0.83
CCDC40-205ENST00000571028 S100A7AQ86SG5 101 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 FAM24BQ8N5W8 94 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 KCNIP2Q9NS61 270 aa9.88□□□□□ -0.83
CCDC40-205ENST00000571028 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
CCDC40-205ENST00000571028 CXorf65A6NEN9 183 aa9.87□□□□□ -0.83
CCDC40-205ENST00000571028 ATF4P18848 351 aaPredicted RBP9.87□□□□□ -0.83
CCDC40-205ENST00000571028 DEFB131AP59861 70 aa9.87□□□□□ -0.83
CCDC40-205ENST00000571028 APRG1Q8IVJ8 170 aa9.87□□□□□ -0.83
CCDC40-205ENST00000571028 PFDN5Q99471 154 aa9.87□□□□□ -0.83
CCDC40-205ENST00000571028 SRD5A3Q9H8P0 318 aa9.87□□□□□ -0.83
CCDC40-205ENST00000571028 NRN1Q9NPD7 142 aa9.87□□□□□ -0.83
CCDC40-205ENST00000571028 H3BTX0 84 aa9.86□□□□□ -0.83
CCDC40-205ENST00000571028 K7EQG2 157 aa9.86□□□□□ -0.83
CCDC40-205ENST00000571028 CXCL2P19875 107 aa9.86□□□□□ -0.83
CCDC40-205ENST00000571028 ZNF124Q15973 351 aa9.86□□□□□ -0.83
CCDC40-205ENST00000571028 FAM78BQ5VT40 261 aa9.86□□□□□ -0.83
CCDC40-205ENST00000571028 SPATA31B1PQ5VZV4 182 aa9.86□□□□□ -0.83
CCDC40-205ENST00000571028 TCTE3Q8IZS6 198 aa9.86□□□□□ -0.83
CCDC40-205ENST00000571028 LINC00052Q96N35 136 aa9.86□□□□□ -0.83
CCDC40-205ENST00000571028 PARD6GQ9BYG4 376 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-205ENST00000571028 MAP6D1Q9H9H5 199 aa9.86□□□□□ -0.83
CCDC40-205ENST00000571028 EIF3GO75821 320 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC40-205ENST00000571028 RPL7P18124 248 aaKnown RBP9.85□□□□□ -0.83
CCDC40-205ENST00000571028 ATP6V0CP27449 155 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 PMS2P11Q13670 270 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 ODF3L2Q3SX64 289 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 PSMG4Q5JS54 123 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 MIR17HGQ75NE6 70 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 KCNRGQ8N5I3 272 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 LRRC20Q8TCA0 184 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 GATAD1Q8WUU5 269 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 GPR82Q96P67 336 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 ARPC5LQ9BPX5 153 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 SH3BGRL3Q9H299 93 aa9.85□□□□□ -0.83
CCDC40-205ENST00000571028 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
CCDC40-205ENST00000571028 HMSDA8MTL9 139 aa9.84□□□□□ -0.83
CCDC40-205ENST00000571028 TAAR5O14804 337 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms