RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SPP1P10451 314 aa9.78□□□□□ -0.84
RPAIN-207ENST00000570883 RAP2BP61225 183 aa9.78□□□□□ -0.84
RPAIN-207ENST00000570883 STX12Q86Y82 276 aa9.78□□□□□ -0.84
RPAIN-207ENST00000570883 C20orf173Q96LM9 149 aa9.78□□□□□ -0.84
RPAIN-207ENST00000570883 LINC00052Q96N35 136 aa9.78□□□□□ -0.84
RPAIN-207ENST00000570883 RSG1Q9BU20 258 aa9.78□□□□□ -0.84
RPAIN-207ENST00000570883 MRPS12O15235 138 aaKnown RBP9.77□□□□□ -0.85
RPAIN-207ENST00000570883 PTTG1O95997 202 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 HLA-DRB4P13762 266 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 CAMLGP49069 296 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 MEOX2P50222 304 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 HBG1P69891 147 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 HBG2P69892 147 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 PRR20EP86478 221 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 PRR20CP86479 221 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 PRR20DP86480 221 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 PRR20BP86481 221 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 PRR20AP86496 221 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 MORN5Q5VZ52 161 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 MIC13Q5XKP0 118 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 MORN3Q6PF18 240 aaPredicted RBP9.77□□□□□ -0.85
RPAIN-207ENST00000570883 OR11H2Q8NH07 326 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 GPR82Q96P67 336 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 ARV1Q9H2C2 271 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 HLA-DRB4X5D2U9 266 aa9.77□□□□□ -0.85
RPAIN-207ENST00000570883 TRAV8-2A0A0B4J237 113 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 E5RGE8 158 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 F6UB75 175 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 S100A7P31151 101 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 S100A11P31949 105 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 ID1P41134 155 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 NHLH2Q02577 135 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 PXDC1Q5TGL8 231 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 CSNK1G2-AS1Q8NCQ2 148 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 PPP1R1CQ8WVI7 109 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 TMEM37Q8WXS4 190 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 C16orf92Q96LL3 132 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 RARRES2Q99969 163 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 SAV1Q9H4B6 383 aaPredicted RBP9.76□□□□□ -0.85
RPAIN-207ENST00000570883 CLEC5AQ9NY25 188 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 ALG5Q9Y673 324 aa9.76□□□□□ -0.85
RPAIN-207ENST00000570883 DNAH1Q9P2D7 4330 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 A0A087X0K7 114 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 MPC2O95563 127 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 RPL7P18124 248 aaKnown RBP9.75□□□□□ -0.85
RPAIN-207ENST00000570883 FGF7P21781 194 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 CYCSP99999 105 aaKnown RBP9.75□□□□□ -0.85
RPAIN-207ENST00000570883 BAXQ07812 192 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 OPCMLQ14982 345 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 SAMD13Q5VXD3 122 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 IGFL4Q6B9Z1 124 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 FOXI2Q6ZQN5 318 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 LINC00305Q7Z4B0 112 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 RNF126Q9BV68 326 aa9.75□□□□□ -0.85
RPAIN-207ENST00000570883 HYDINQ4G0P3 5121 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 A0A0J9YX75 114 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 COX7A2P2O60397 106 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 IGKV3-20P01619 116 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 RLN2P04090 185 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 ATF4P18848 351 aaPredicted RBP9.74□□□□□ -0.85
RPAIN-207ENST00000570883 CXCL3P19876 107 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 RAB31Q13636 194 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 ATP6V1FQ16864 119 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 TMEM41BQ5BJD5 291 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 RNF182Q8N6D2 247 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 Q8NAQ8 132 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 OR5C1Q8NGR4 320 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 CHAC2Q8WUX2 184 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
RPAIN-207ENST00000570883 X6R8D5 127 aa9.74□□□□□ -0.85
RPAIN-207ENST00000570883 A8MTW9 85 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 ZNF705EA8MWA4 302 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-207ENST00000570883 DEFB4AO15263 64 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 HLA-DMBP28068 263 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 RPL29P47914 159 aaKnown RBP9.73□□□□□ -0.85
RPAIN-207ENST00000570883 B2MP61769 119 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 FGL1Q08830 312 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 C10orf113Q5VZT2 155 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 S100A7AQ86SG5 101 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 ZNF709Q8N972 641 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 THAP6Q8TBB0 222 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 CLUHP3Q96NS8 147 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 SLC25A31Q9H0C2 315 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 RPRMQ9NS64 109 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 SLC39A9Q9NUM3 307 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 XCL2Q9UBD3 114 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 ALMS1Q8TCU4 4167 aa9.73□□□□□ -0.85
RPAIN-207ENST00000570883 ELOA3CA0A087WX78 387 aaPredicted RBP9.72□□□□□ -0.85
RPAIN-207ENST00000570883 SNRPCP09234 159 aaKnown RBP9.72□□□□□ -0.85
RPAIN-207ENST00000570883 FXYD7P58549 80 aa9.72□□□□□ -0.85
RPAIN-207ENST00000570883 PMS2P11Q13670 270 aa9.72□□□□□ -0.85
RPAIN-207ENST00000570883 CLINT1Q14677 625 aa9.72□□□□□ -0.85
RPAIN-207ENST00000570883 FAM78BQ5VT40 261 aa9.72□□□□□ -0.85
RPAIN-207ENST00000570883 NPCDR1Q9BY65 106 aa9.72□□□□□ -0.85
RPAIN-207ENST00000570883 SLC35B3Q9H1N7 401 aa9.72□□□□□ -0.85
RPAIN-207ENST00000570883 DNAJC4Q9NNZ3 241 aa9.72□□□□□ -0.85
RPAIN-207ENST00000570883 MBD2Q9UBB5 411 aa9.72□□□□□ -0.85
RPAIN-207ENST00000570883 PXMP4Q9Y6I8 212 aa9.72□□□□□ -0.85
RPAIN-207ENST00000570883 TRAV5A0A0B4J249 113 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms