RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 HELTA6NFD8 242 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 K7EMT4 169 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 RPL7P18124 248 aaKnown RBP5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 SULT1A2P50226 295 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 RPL11P62913 178 aaKnown RBP5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 UBE2L3P68036 154 aaKnown RBP5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 KLF5Q13887 457 aaPredicted RBP5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 TM4SF20Q53R12 229 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 ZNF767PQ75MW2 155 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 BPIFA4PQ86YQ2 179 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR8I2Q8N0Y5 310 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 DLX4Q92988 240 aaPredicted RBP5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 GPR82Q96P67 336 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 SHANK2-AS3Q9BTD1 123 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 MAP1LC3BQ9GZQ8 125 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 IGHV3OR16-13A0A075B7E8 117 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 IGHV3-74A0A0B4J1X5 117 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 TMEM213A2RRL7 107 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 C2orf70A6NJV1 201 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 ZNF98A6NK75 572 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 SEC14L6B5MCN3 397 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 CXorf1O96002 111 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 HBE1P02100 147 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 CD5P06127 495 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 C8orf88P0DMB2 117 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 FOLR2P14207 255 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 CRYBB3P26998 211 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 BLOC1S1P78537 153 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 C1orf194Q5T5A4 169 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 LEMD1Q68G75 181 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 LCN15Q6UWW0 184 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 SIGLEC15Q6ZMC9 328 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 PQLC2Q6ZP29 291 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 RBPMS2Q6ZRY4 209 aaKnown RBP5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 MIR17HGQ75NE6 70 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 LINC00482Q8N8I6 264 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 ZNF680Q8NEM1 530 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 SFT2D1Q8WV19 159 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 TMEM37Q8WXS4 190 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 RAB24Q969Q5 203 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 MCRIP2Q9BUT9 160 aaKnown RBP5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 RHPN1-AS1Q9BWJ2 59 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 GPR61Q9BZJ8 451 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 VSIRQ9H7M9 311 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 SEPSECSQ9HD40 501 aaKnown RBP5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 RPRMQ9NS64 109 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 MRPL27Q9P0M9 148 aaKnown RBP5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 RFNGQ9Y644 331 aa5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 TET2Q6N021 2002 aaPredicted RBP5.02□□□□□ -1.61
CTDNEP1-204ENST00000570484 A0A1B0GV50 99 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 ZNF785A8K8V0 405 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 HMGB3O15347 200 aaKnown RBP5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 IFNA1P01562 189 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 ARL14EPLP0DKL9 152 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 CBLN1P23435 193 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 FHITP49789 147 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 MEOX2P50222 304 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 PPT1P50897 306 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 C9orf66Q5T8R8 295 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 SAMD13Q5VXD3 122 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 SPATA31B1PQ5VZV4 182 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 LCN12Q6JVE5 192 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 PATE2Q6UY27 113 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 IL34Q6ZMJ4 242 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 TCF24Q7RTU0 167 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 RPP25LQ8N5L8 163 aaKnown RBP5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 SAT2Q96F10 170 aaPredicted RBP5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 PAXXQ9BUH6 204 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 SLC25A2Q9BXI2 301 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 TMEM167BQ9NRX6 74 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 SMPXQ9UHP9 88 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 TMA7Q9Y2S6 64 aaKnown RBP5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 X6R8D5 127 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 TEP1Q99973 2627 aaKnown RBP5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 NF1P21359 2839 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 CUBNO60494 3623 aa5.01□□□□□ -1.61
CTDNEP1-204ENST00000570484 IGKV3-7A0A075B6H7 116 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 TRAV5A0A0B4J249 113 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 DNASE2O00115 360 aaPredicted RBP5□□□□□ -1.61
CTDNEP1-204ENST00000570484 CHEK1O14757 476 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 BUB3O43684 328 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 OR10J4P0C629 311 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 STAG3L2P0CL84 134 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 STAG3L3P0CL85 134 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 GP9P14770 177 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 INSL3P51460 131 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 FGF8P55075 233 aaPredicted RBP5□□□□□ -1.61
CTDNEP1-204ENST00000570484 PAFAH1B2P68402 229 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 KIR3DS1Q14943 382 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 GUK1Q16774 197 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 LCE3BQ5TA77 95 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 MORN5Q5VZ52 161 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 C16orf54Q6UWD8 224 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 BLNKQ8WV28 456 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 OR51M1Q9H341 326 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 HRH4Q9H3N8 390 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 NRN1Q9NPD7 142 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 MANBALQ9NQG1 85 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 TMEM14CQ9P0S9 112 aa5□□□□□ -1.61
CTDNEP1-204ENST00000570484 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms