RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 PRR20CP86479 221 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 PRR20DP86480 221 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 PRR20BP86481 221 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 PRR20AP86496 221 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 RAB31Q13636 194 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 LRRC37A5PQ49AS3 106 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 ACTL10Q5JWF8 245 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 GATAD1Q8WUU5 269 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 CHAC2Q8WUX2 184 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 PPP1R1CQ8WVI7 109 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 UHRF2Q96PU4 802 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 RSG1Q9BU20 258 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 RNF126Q9BV68 326 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 ARV1Q9H2C2 271 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 LYSTQ99698 3801 aa8.1□□□□□ -1.11
SHCBP1-207ENST00000569702 TENM2Q9NT68 2774 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 H3BMM0 161 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 MPC2O95563 127 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 SPP1P10451 314 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 EWSR1Q01844 656 aaKnown RBP eCLIP8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 NHLH2Q02577 135 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 TMEM41BQ5BJD5 291 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 MORN3Q6PF18 240 aaPredicted RBP8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 S100A7AQ86SG5 101 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 TMEM37Q8WXS4 190 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 SLC25A31Q9H0C2 315 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 ALG5Q9Y673 324 aa8.09□□□□□ -1.11
SHCBP1-207ENST00000569702 ELOA3CA0A087WX78 387 aaPredicted RBP8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 UBE2L5PA0A1B0GUS4 154 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 MRPS12O15235 138 aaKnown RBP8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 HLA-DRB4P13762 266 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 RPL7P18124 248 aaKnown RBP8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 C4BPBP20851 252 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 RPL29P47914 159 aaKnown RBP8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 DEFB1P60022 68 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 BAXQ07812 192 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 GDF5OSQ5U4N7 250 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 MIC13Q5XKP0 118 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 FOXI2Q6ZQN5 318 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 LINC00305Q7Z4B0 112 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 OR5C1Q8NGR4 320 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 C20orf173Q96LM9 149 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 LINC00052Q96N35 136 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 CLUHP3Q96NS8 147 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 RARRES2Q99969 163 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 SAV1Q9H4B6 383 aaPredicted RBP8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 RNF24Q9Y225 148 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 HLA-DRB4X5D2U9 266 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 RYR3Q15413 4870 aa8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 PLECQ15149 4684 aaKnown RBP8.08□□□□□ -1.12
SHCBP1-207ENST00000569702 DNAH1Q9P2D7 4330 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 A0A087X0K7 114 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 TRAV8-2A0A0B4J237 113 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 A0A0J9YWU9 116 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 COX7A2P2O60397 106 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 MPDU1O75352 247 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 PET100P0DJ07 73 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 ATF4P18848 351 aaPredicted RBP8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 CXCL3P19876 107 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 OPCMLQ14982 345 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 SPATA31B1PQ5VZV4 182 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 ZFAND6Q6FIF0 208 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 Q6ZRG5 221 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 CSNK1G2-AS1Q8NCQ2 148 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 OR11H2Q8NH07 326 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 IL17DQ8TAD2 202 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 C16orf92Q96LL3 132 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 DNAJC4Q9NNZ3 241 aa8.07□□□□□ -1.12
SHCBP1-207ENST00000569702 FGF7P21781 194 aa8.06□□□□□ -1.12
SHCBP1-207ENST00000569702 MORN5Q5VZ52 161 aa8.06□□□□□ -1.12
SHCBP1-207ENST00000569702 C10orf113Q5VZT2 155 aa8.06□□□□□ -1.12
SHCBP1-207ENST00000569702 RPRMQ9NS64 109 aa8.06□□□□□ -1.12
SHCBP1-207ENST00000569702 SLC39A9Q9NUM3 307 aa8.06□□□□□ -1.12
SHCBP1-207ENST00000569702 A0A0J9YX75 114 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 A8MTW9 85 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 ZNF705EA8MWA4 302 aaPredicted RBP8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 F6UB75 175 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 B2MP61769 119 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 NUTF2P61970 127 aaKnown RBP8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 BPIFA4PQ86YQ2 179 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 OR11H7Q8NGC8 314 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 OR1L4Q8NGR5 311 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 PFDN5Q99471 154 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 NPCDR1Q9BY65 106 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 C11orf68Q9H3H3 251 aaKnown RBP8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 MBD2Q9UBB5 411 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 PXMP4Q9Y6I8 212 aa8.05□□□□□ -1.12
SHCBP1-207ENST00000569702 IGLC2P0DOY2 106 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 CXCL2P19875 107 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 RPL12P30050 165 aaKnown RBP8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 FGL1Q08830 312 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 CLINT1Q14677 625 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 FCN2Q15485 313 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 IGFL4Q6B9Z1 124 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 EBLN2Q6P2I7 272 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 ZNF709Q8N972 641 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 Q8NAQ8 132 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 THAP6Q8TBB0 222 aa8.04□□□□□ -1.12
SHCBP1-207ENST00000569702 C1QTNF4Q9BXJ3 329 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms