RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 ARL16Q0P5N6 197 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 VWC2Q2TAL6 325 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 ACTL10Q5JWF8 245 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 Q6ZRG5 221 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 TRPT1Q86TN4 253 aaKnown RBP7.23□□□□□ -1.25
CLN6-209ENST00000569336 RNF183Q96D59 192 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 PFDN5Q99471 154 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 LYSTQ99698 3801 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 OVOL2Q9BRP0 275 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 SHANK2-AS3Q9BTD1 123 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 SLC25A39Q9BZJ4 359 aaPredicted RBP7.23□□□□□ -1.25
CLN6-209ENST00000569336 SLC25A32Q9H2D1 315 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 KCNIP2Q9NS61 270 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 WDR83OSQ9Y284 106 aa7.23□□□□□ -1.25
CLN6-209ENST00000569336 H2BFSP57053 126 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 SPATA31B1PQ5VZV4 182 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 TMEM182Q6ZP80 229 aaPredicted RBP7.22□□□□□ -1.25
CLN6-209ENST00000569336 OR1L4Q8NGR5 311 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 PPP1R1CQ8WVI7 109 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 C16orf92Q96LL3 132 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 MGST2Q99735 147 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 SCRT1Q9BWW7 348 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 C1QTNF4Q9BXJ3 329 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 ARV1Q9H2C2 271 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 RPRMQ9NS64 109 aa7.22□□□□□ -1.25
CLN6-209ENST00000569336 SOCS3O14543 225 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 MPC2O95563 127 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 HLA-DRB4P13762 266 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 FGF7P21781 194 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 EWSR1Q01844 656 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLN6-209ENST00000569336 C10orf113Q5VZT2 155 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 FOXI2Q6ZQN5 318 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 LINC00305Q7Z4B0 112 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 OR5C1Q8NGR4 320 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 LINC00052Q96N35 136 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 UHRF2Q96PU4 802 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 RSG1Q9BU20 258 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 OR5AC2Q9NZP5 309 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 ALG5Q9Y673 324 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 HLA-DRB4X5D2U9 266 aa7.21□□□□□ -1.26
CLN6-209ENST00000569336 A0A087X0K7 114 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 KNCNA6PVL3 124 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 CXCL2P19875 107 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 RPL29P47914 159 aaKnown RBP7.2□□□□□ -1.26
CLN6-209ENST00000569336 B2MP61769 119 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 PRR20EP86478 221 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 PRR20CP86479 221 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 PRR20DP86480 221 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 PRR20BP86481 221 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 PRR20AP86496 221 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 OPCMLQ14982 345 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 RGS21Q2M5E4 152 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 CASC10Q5T4H9 136 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 EBLN2Q6P2I7 272 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 LCN15Q6UWW0 184 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 BPIFA4PQ86YQ2 179 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 CHAC2Q8WUX2 184 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 ASB13Q8WXK3 278 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 CLUHP3Q96NS8 147 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 MED28Q9H204 178 aa7.2□□□□□ -1.26
CLN6-209ENST00000569336 SAV1Q9H4B6 383 aaPredicted RBP7.2□□□□□ -1.26
CLN6-209ENST00000569336 C17orf112F2Z3M2 114 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 H3BMM0 161 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 NHLH2Q02577 135 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 FGL1Q08830 312 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 ZNF709Q8N972 641 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 OR11H2Q8NH07 326 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 THAP6Q8TBB0 222 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 LRRC20Q8TCA0 184 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 RARRES2Q99969 163 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 SLC50A1Q9BRV3 221 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 NPCDR1Q9BY65 106 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 C11orf68Q9H3H3 251 aaKnown RBP7.19□□□□□ -1.26
CLN6-209ENST00000569336 DNAJC4Q9NNZ3 241 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 SLC39A9Q9NUM3 307 aa7.19□□□□□ -1.26
CLN6-209ENST00000569336 A0A0J9YWU9 116 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 H0YIZ8 118 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 C4BPBP20851 252 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 CLINT1Q14677 625 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 GUK1Q16774 197 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 MIC13Q5XKP0 118 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 PATE2Q6UY27 113 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 ATP5SQ99766 215 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 MBD2Q9UBB5 411 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 HSPB11Q9Y547 144 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 PXMP4Q9Y6I8 212 aa7.18□□□□□ -1.26
CLN6-209ENST00000569336 A0A0J9YX75 114 aa7.17□□□□□ -1.26
CLN6-209ENST00000569336 IFNA5P01569 189 aa7.17□□□□□ -1.26
CLN6-209ENST00000569336 MIFP14174 115 aa7.17□□□□□ -1.26
CLN6-209ENST00000569336 RPL12P30050 165 aaKnown RBP7.17□□□□□ -1.26
CLN6-209ENST00000569336 ZFAND6Q6FIF0 208 aa7.17□□□□□ -1.26
CLN6-209ENST00000569336 ZNF738Q8NE65 137 aa7.17□□□□□ -1.26
CLN6-209ENST00000569336 OR4B1Q8NGF8 309 aa7.17□□□□□ -1.26
CLN6-209ENST00000569336 TMEM37Q8WXS4 190 aa7.17□□□□□ -1.26
CLN6-209ENST00000569336 WDR61Q9GZS3 305 aaKnown RBP7.17□□□□□ -1.26
CLN6-209ENST00000569336 MFFQ9GZY8 342 aa7.17□□□□□ -1.26
CLN6-209ENST00000569336 CLEC5AQ9NY25 188 aa7.17□□□□□ -1.26
CLN6-209ENST00000569336 DUSP14O95147 198 aaKnown RBP7.16□□□□□ -1.26
CLN6-209ENST00000569336 AMBPP02760 352 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms