RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TM2D3Q9BRN9 247 aa9.49□□□□□ -0.89
CDT1-203ENST00000569140 NPCDR1Q9BY65 106 aa9.49□□□□□ -0.89
CDT1-203ENST00000569140 SLC39A9Q9NUM3 307 aa9.49□□□□□ -0.89
CDT1-203ENST00000569140 PXMP4Q9Y6I8 212 aa9.49□□□□□ -0.89
CDT1-203ENST00000569140 FXYD6-FXYD2A0A087WZ82 144 aa9.48□□□□□ -0.89
CDT1-203ENST00000569140 IFNA5P01569 189 aa9.48□□□□□ -0.89
CDT1-203ENST00000569140 RPL7P18124 248 aaKnown RBP9.48□□□□□ -0.89
CDT1-203ENST00000569140 OPCMLQ14982 345 aa9.48□□□□□ -0.89
CDT1-203ENST00000569140 PATE2Q6UY27 113 aa9.48□□□□□ -0.89
CDT1-203ENST00000569140 OR1L4Q8NGR5 311 aa9.48□□□□□ -0.89
CDT1-203ENST00000569140 SCGB1C1Q8TD33 95 aa9.48□□□□□ -0.89
CDT1-203ENST00000569140 RNF24Q9Y225 148 aa9.48□□□□□ -0.89
CDT1-203ENST00000569140 ELOA3CA0A087WX78 387 aaPredicted RBP9.47□□□□□ -0.89
CDT1-203ENST00000569140 C17orf112F2Z3M2 114 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 RPL29P47914 159 aaKnown RBP9.47□□□□□ -0.89
CDT1-203ENST00000569140 MEOX2P50222 304 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 PRR20EP86478 221 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 PRR20CP86479 221 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 PRR20DP86480 221 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 PRR20BP86481 221 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 PRR20AP86496 221 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 DEFB135Q30KP9 77 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 LRRC20Q8TCA0 184 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 PFDN5Q99471 154 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 WDR61Q9GZS3 305 aaKnown RBP9.47□□□□□ -0.89
CDT1-203ENST00000569140 KCNIP2Q9NS61 270 aa9.47□□□□□ -0.89
CDT1-203ENST00000569140 CA1P00915 261 aaPredicted RBP9.46□□□□□ -0.9
CDT1-203ENST00000569140 SNRPCP09234 159 aaKnown RBP9.46□□□□□ -0.9
CDT1-203ENST00000569140 LYL1P12980 280 aa9.46□□□□□ -0.9
CDT1-203ENST00000569140 PSMB3P49720 205 aa9.46□□□□□ -0.9
CDT1-203ENST00000569140 SAMD13Q5VXD3 122 aa9.46□□□□□ -0.9
CDT1-203ENST00000569140 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.46□□□□□ -0.9
CDT1-203ENST00000569140 OR2T35Q8NGX2 323 aa9.46□□□□□ -0.9
CDT1-203ENST00000569140 ASB13Q8WXK3 278 aa9.46□□□□□ -0.9
CDT1-203ENST00000569140 TMEM37Q8WXS4 190 aa9.46□□□□□ -0.9
CDT1-203ENST00000569140 DNAJC4Q9NNZ3 241 aa9.46□□□□□ -0.9
CDT1-203ENST00000569140 KIR2DL5BA0A0G2JN68 375 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 KIR2DL5BA0A0G2JPC4 375 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 ISLRO14498 428 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 Q5BKY6 102 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 MORN5Q5VZ52 161 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 IGFL4Q6B9Z1 124 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 KIR2DL5AQ8N109 375 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 KIR2DL5BQ8NHK3 375 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 WWC2-AS2Q96NR7 200 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 CSTL1Q9H114 145 aa9.45□□□□□ -0.9
CDT1-203ENST00000569140 TRAV5A0A0B4J249 113 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 H3BTX0 84 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 UBE2CO00762 179 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 SOCS3O14543 225 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 IGKV3-20P01619 116 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 DEFB1P60022 68 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 GCSAMLQ5JQS6 135 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 EBLN2Q6P2I7 272 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 BPIFA4PQ86YQ2 179 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 INO80EQ8NBZ0 244 aaPredicted RBP9.44□□□□□ -0.9
CDT1-203ENST00000569140 SEPSECSQ9HD40 501 aaKnown RBP9.44□□□□□ -0.9
CDT1-203ENST00000569140 RPRMQ9NS64 109 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 TGP01266 2768 aa9.44□□□□□ -0.9
CDT1-203ENST00000569140 SMLR1H3BR10 107 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 SPRY2O43597 315 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 FFAR4Q5NUL3 377 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 FAM78BQ5VT40 261 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 TRPT1Q86TN4 253 aaKnown RBP9.43□□□□□ -0.9
CDT1-203ENST00000569140 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 ZNF738Q8NE65 137 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 OR4B1Q8NGF8 309 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 GATAD1Q8WUU5 269 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 CHAC2Q8WUX2 184 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 C20orf173Q96LM9 149 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 WFDC1Q9HC57 220 aa9.43□□□□□ -0.9
CDT1-203ENST00000569140 DNAH9Q9NYC9 4486 aa9.42□□□□□ -0.9
CDT1-203ENST00000569140 A0A087X0K7 114 aa9.42□□□□□ -0.9
CDT1-203ENST00000569140 F6UB75 175 aa9.42□□□□□ -0.9
CDT1-203ENST00000569140 SPP1P10451 314 aa9.42□□□□□ -0.9
CDT1-203ENST00000569140 ZNF266Q14584 549 aa9.42□□□□□ -0.9
CDT1-203ENST00000569140 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
CDT1-203ENST00000569140 Q6ZWC4 215 aa9.42□□□□□ -0.9
CDT1-203ENST00000569140 AQP10Q96PS8 301 aa9.42□□□□□ -0.9
CDT1-203ENST00000569140 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
CDT1-203ENST00000569140 ARPC5O15511 151 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 PRB4P10163 310 aaPredicted RBP9.41□□□□□ -0.9
CDT1-203ENST00000569140 HLA-DMBP28068 263 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 FXYD7P58549 80 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 NUTF2P61970 127 aaKnown RBP9.41□□□□□ -0.9
CDT1-203ENST00000569140 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 SPATA31B1PQ5VZV4 182 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 LCN15Q6UWW0 184 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 FOXI2Q6ZQN5 318 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 MIR17HGQ75NE6 70 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 HSD17B11Q8NBQ5 300 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 C17orf77Q96MU5 243 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 SAV1Q9H4B6 383 aaPredicted RBP9.41□□□□□ -0.9
CDT1-203ENST00000569140 CLEC5AQ9NY25 188 aa9.41□□□□□ -0.9
CDT1-203ENST00000569140 TRAV8-2A0A0B4J237 113 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 H3BMM0 161 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 PYYP10082 97 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 HLA-DRB4P13762 266 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 C4BPBP20851 252 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 BLNKQ8WV28 456 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms