RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 OR1S1Q8NH92 325 aa11.03□□□□□ -0.64
HERPUD1-215ENST00000568676 SLC25A32Q9H2D1 315 aa11.03□□□□□ -0.64
HERPUD1-215ENST00000568676 SLC25A22Q9H936 323 aa11.03□□□□□ -0.64
HERPUD1-215ENST00000568676 DUXBA0A1W2PPF3 345 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 H3BMQ9 156 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 CTDSPLO15194 276 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 RPP30P78346 268 aaKnown RBP11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 LYZL2Q7Z4W2 148 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 BPIFCQ8NFQ6 507 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 OR51S1Q8NGJ8 323 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 DYNC2LI1Q8TCX1 351 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 CIB3Q96Q77 187 aaPredicted RBP11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 SCRT2Q9NQ03 307 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 LINC00588Q9Y4M8 146 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 LRP1BQ9NZR2 4599 aa11.02□□□□□ -0.65
HERPUD1-215ENST00000568676 IGKV1OR2-108A0A075B7D4 117 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 PLAC8L1A1L4L8 177 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 BOLA2-SMG1P6H3BVE0 249 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 M0R2Z0 102 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 TAS2R60P59551 318 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 SPATA12Q7Z6I5 190 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 ZNF503Q96F45 646 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 C16orf74Q96GX8 76 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 Q9H8V8 135 aa11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 TIMM8BQ9Y5J9 83 aaPredicted RBP11.01□□□□□ -0.65
HERPUD1-215ENST00000568676 A0A1W2PPQ1 181 aa11□□□□□ -0.65
HERPUD1-215ENST00000568676 ZNF701M0R085 212 aaPredicted RBP11□□□□□ -0.65
HERPUD1-215ENST00000568676 MED6O75586 246 aa11□□□□□ -0.65
HERPUD1-215ENST00000568676 SLC25A6P12236 298 aa11□□□□□ -0.65
HERPUD1-215ENST00000568676 ZNF493Q6ZR52 646 aa11□□□□□ -0.65
HERPUD1-215ENST00000568676 SSX7Q7RTT5 188 aa11□□□□□ -0.65
HERPUD1-215ENST00000568676 OR10J6PQ8NGY7 276 aa11□□□□□ -0.65
HERPUD1-215ENST00000568676 RNF141Q8WVD5 230 aa11□□□□□ -0.65
HERPUD1-215ENST00000568676 TMEM147Q9BVK8 224 aa11□□□□□ -0.65
HERPUD1-215ENST00000568676 RSL24D1Q9UHA3 163 aaKnown RBP11□□□□□ -0.65
HERPUD1-215ENST00000568676 PITX3O75364 302 aa10.99□□□□□ -0.65
HERPUD1-215ENST00000568676 ADAP1O75689 374 aa10.99□□□□□ -0.65
HERPUD1-215ENST00000568676 S100A7AQ86SG5 101 aa10.99□□□□□ -0.65
HERPUD1-215ENST00000568676 BAP18Q8IXM2 172 aa10.99□□□□□ -0.65
HERPUD1-215ENST00000568676 C17orf77Q96MU5 243 aa10.99□□□□□ -0.65
HERPUD1-215ENST00000568676 LINC01587Q99440 93 aa10.99□□□□□ -0.65
HERPUD1-215ENST00000568676 MIXL1Q9H2W2 232 aa10.99□□□□□ -0.65
HERPUD1-215ENST00000568676 Q9H3A6 140 aa10.99□□□□□ -0.65
HERPUD1-215ENST00000568676 ANKRD20A5PA0PJZ0 165 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 CTDSP2O14595 271 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 RPL7P18124 248 aaKnown RBP10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 ORM2P19652 201 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 AZU1P20160 251 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 IL18Q14116 193 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 TMEM144Q7Z5S9 345 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 ZNF738Q8NE65 137 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 DIRAS2Q96HU8 199 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 UPK3BQ9BT76 320 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 PPP1R14DQ9NXH3 145 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 PRR13Q9NZ81 148 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 PAIP2BQ9ULR5 123 aaKnown RBP10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 RNF24Q9Y225 148 aa10.98□□□□□ -0.65
HERPUD1-215ENST00000568676 TRAV8-2A0A0B4J237 113 aa10.97□□□□□ -0.65
HERPUD1-215ENST00000568676 PRM2P04554 102 aa10.97□□□□□ -0.65
HERPUD1-215ENST00000568676 MCFD2Q8NI22 146 aa10.97□□□□□ -0.65
HERPUD1-215ENST00000568676 TMEM263Q8WUH6 116 aaKnown RBP10.97□□□□□ -0.65
HERPUD1-215ENST00000568676 GNPNAT1Q96EK6 184 aaPredicted RBP10.97□□□□□ -0.65
HERPUD1-215ENST00000568676 C20orf144Q9BQM9 153 aa10.97□□□□□ -0.65
HERPUD1-215ENST00000568676 SLIRPQ9GZT3 109 aaKnown RBP10.97□□□□□ -0.65
HERPUD1-215ENST00000568676 NDUFA13Q9P0J0 144 aa10.97□□□□□ -0.65
HERPUD1-215ENST00000568676 TRAV12-2A0A075B6T6 113 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 PRSS46E5RG02 174 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 H3BNG1 76 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 H3BRN7 92 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 IAPPP10997 89 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 RAP2BP61225 183 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 RHOBP62745 196 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 FGL1Q08830 312 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 FCN2Q15485 313 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 RNF182Q8N6D2 247 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 LRTM2Q8N967 370 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 OR8A1Q8NGG7 326 aa10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 RBM38Q9H0Z9 239 aaKnown RBP10.96□□□□□ -0.65
HERPUD1-215ENST00000568676 H7BYZ3 331 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 SYNGR2O43760 224 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 M6PRP20645 277 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 S100A5P33763 92 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 CDKN1BP46527 198 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 HIST1H1AQ02539 215 aaPredicted RBP10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 AKR1C1Q04828 323 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 TMEM128Q5BJH2 165 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 RNASE8Q8TDE3 154 aaKnown RBP10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 RXFP4Q8TDU9 374 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 SHANK2-AS3Q9BTD1 123 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 SLC25A39Q9BZJ4 359 aaPredicted RBP10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 MCUBQ9NWR8 336 aa10.95□□□□□ -0.66
HERPUD1-215ENST00000568676 A0A087X0K7 114 aa10.94□□□□□ -0.66
HERPUD1-215ENST00000568676 CXCL3P19876 107 aa10.94□□□□□ -0.66
HERPUD1-215ENST00000568676 SELENOTP62341 195 aa10.94□□□□□ -0.66
HERPUD1-215ENST00000568676 IGFL4Q6B9Z1 124 aa10.94□□□□□ -0.66
HERPUD1-215ENST00000568676 NOP10Q9NPE3 64 aaKnown RBP10.94□□□□□ -0.66
HERPUD1-215ENST00000568676 HIGD1AQ9Y241 93 aa10.94□□□□□ -0.66
HERPUD1-215ENST00000568676 TRAV26-1A0A087WT03 109 aa10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 FABP12A6NFH5 140 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms