RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SLC45A2Q9UMX9 530 aa8.16□□□□□ -1.1
GTF3C1-209ENST00000568569 MRPS16Q9Y3D3 137 aaKnown RBP8.16□□□□□ -1.1
GTF3C1-209ENST00000568569 TMEM56-RWDD3S4R434 201 aa8.16□□□□□ -1.1
GTF3C1-209ENST00000568569 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 CRYM-AS1A6NIL9 109 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 ZNF98A6NK75 572 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 FAM25AB3EWG3 89 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 FAM25CB3EWG5 89 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 FAM25GB3EWG6 89 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 EREGO14944 169 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 HTN1P15515 57 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 CCR6P51684 374 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 SURF2Q15527 256 aaPredicted RBP8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 ESRGQ1W209 222 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 GGNBP1Q5YKI7 109 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 STEAP1BQ6NZ63 245 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 ZNF493Q6ZR52 646 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 ZNF738Q8NE65 137 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 RNASE8Q8TDE3 154 aaKnown RBP8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 IL22RA2Q969J5 263 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 RBKSQ9H477 322 aa8.15□□□□□ -1.1
GTF3C1-209ENST00000568569 IGKV1OR2-108A0A075B7D4 117 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 TRAV8-2A0A0B4J237 113 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 A0A0J9YY99 117 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 H3BNG1 76 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 ZNF701M0R085 212 aaPredicted RBP8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 ADAP1O75689 374 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 S100A7P31151 101 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 SMCO1Q147U7 214 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 IGFL4Q6B9Z1 124 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 Q6ZRN7 208 aaPredicted RBP8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 RNF182Q8N6D2 247 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 THAP8Q8NA92 274 aa8.14□□□□□ -1.11
GTF3C1-209ENST00000568569 ERVFC1-1P60608 527 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 NCS1P62166 190 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 RAB11AP62491 216 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 RHOBP62745 196 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 HIST1H1AQ02539 215 aaPredicted RBP8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 FGL1Q08830 312 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 FAAP20Q6NZ36 180 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 MZT2AQ6P582 158 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 C15orf40Q8WUR7 153 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 C18orf15Q96N68 181 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 TMEM147Q9BVK8 224 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 VCX3AQ9NNX9 186 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 PPP1R14DQ9NXH3 145 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 EXTL2Q9UBQ6 330 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 VPS13BQ7Z7G8 4022 aa8.13□□□□□ -1.11
GTF3C1-209ENST00000568569 A0A0B4J2A0 478 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 H7BYZ3 331 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 ORM2P19652 201 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 HOXA5P20719 270 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 FUSP35637 526 aaKnown RBP eCLIP8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 CDKN1BP46527 198 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 LINC00612Q8N6U2 182 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 OR8A1Q8NGG7 326 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 PRR13Q9NZ81 148 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 SHPKQ9UHJ6 478 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 GPR132Q9UNW8 380 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 KCNIP3Q9Y2W7 256 aa8.12□□□□□ -1.11
GTF3C1-209ENST00000568569 DISC1C4P0D8 188 aa8.11□□□□□ -1.11
GTF3C1-209ENST00000568569 RLN2P04090 185 aa8.11□□□□□ -1.11
GTF3C1-209ENST00000568569 AKR1C4P17516 323 aa8.11□□□□□ -1.11
GTF3C1-209ENST00000568569 VBP1P61758 197 aa8.11□□□□□ -1.11
GTF3C1-209ENST00000568569 SSBP1Q04837 148 aaKnown RBP8.11□□□□□ -1.11
GTF3C1-209ENST00000568569 LYZL2Q7Z4W2 148 aa8.11□□□□□ -1.11
GTF3C1-209ENST00000568569 BPIFCQ8NFQ6 507 aa8.11□□□□□ -1.11
GTF3C1-209ENST00000568569 OR1S1Q8NH92 325 aa8.11□□□□□ -1.11
GTF3C1-209ENST00000568569 AP3S1Q92572 193 aa8.11□□□□□ -1.11
GTF3C1-209ENST00000568569 GAGE12BA1L429 117 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 GAGE7O76087 117 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 IFNA5P01569 189 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 GAGE12FP0CL80 117 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 GAGE12GP0CL81 117 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 GAGE12IP0CL82 117 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 RPL7P18124 248 aaKnown RBP8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 CXCL3P19876 107 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 CCDC28AQ8IWP9 274 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 PRRT1Q99946 306 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 C20orf144Q9BQM9 153 aa8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 PAIP2BQ9ULR5 123 aaKnown RBP8.1□□□□□ -1.11
GTF3C1-209ENST00000568569 H3BRN7 92 aa8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 SIVA1O15304 175 aa8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 IAPPP10997 89 aa8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 GATA2P23769 480 aaPredicted RBP8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 SRPXP78539 464 aa8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 MRPS10P82664 201 aaKnown RBP8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 ICAM4Q14773 271 aa8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 TMEM182Q6ZP80 229 aaPredicted RBP8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 SHANK2-AS3Q9BTD1 123 aa8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 FUNDC2Q9BWH2 189 aa8.09□□□□□ -1.11
GTF3C1-209ENST00000568569 A0A087X0K7 114 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 A0A096LPF7 62 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 PIGBOS1A0A0B4J2F0 54 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 SNURFLB1AK76 121 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 J3QL48 77 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms