RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 MIC13Q5XKP0 118 aa9.51□□□□□ -0.89
TSC2-220ENST00000568238 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
TSC2-220ENST00000568238 AKAP14Q86UN6 197 aa9.51□□□□□ -0.89
TSC2-220ENST00000568238 APRG1Q8IVJ8 170 aa9.51□□□□□ -0.89
TSC2-220ENST00000568238 GBGT1Q8N5D6 347 aa9.51□□□□□ -0.89
TSC2-220ENST00000568238 GRAMD2BQ96HH9 432 aa9.51□□□□□ -0.89
TSC2-220ENST00000568238 ST6GAL2Q96JF0 529 aa9.51□□□□□ -0.89
TSC2-220ENST00000568238 WDR61Q9GZS3 305 aaKnown RBP9.51□□□□□ -0.89
TSC2-220ENST00000568238 ARL6Q9H0F7 186 aa9.51□□□□□ -0.89
TSC2-220ENST00000568238 U3KQE9 123 aa9.51□□□□□ -0.89
TSC2-220ENST00000568238 CXorf65A6NEN9 183 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 COX7A2P2O60397 106 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 MPDU1O75352 247 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 RPL11P62913 178 aaKnown RBP9.5□□□□□ -0.89
TSC2-220ENST00000568238 PMS2P11Q13670 270 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 OPCMLQ14982 345 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 ZNF124Q15973 351 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 FAM90A2PQ658T7 463 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 RNF183Q96D59 192 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 MAP6D1Q9H9H5 199 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 PFDN2Q9UHV9 154 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 HIGD1AQ9Y241 93 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 PXMP4Q9Y6I8 212 aa9.5□□□□□ -0.89
TSC2-220ENST00000568238 FRAS1Q86XX4 4008 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 BUB3O43684 328 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 B2MP61769 119 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 PRR20EP86478 221 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 PRR20CP86479 221 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 PRR20DP86480 221 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 PRR20BP86481 221 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 PRR20AP86496 221 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 C16orf54Q6UWD8 224 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 ZNF709Q8N972 641 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 OR11H4Q8NGC9 324 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 SCGB1C1Q8TD33 95 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 UHRF2Q96PU4 802 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 SCRT1Q9BWW7 348 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 MFFQ9GZY8 342 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 SLC25A22Q9H936 323 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 SLC39A9Q9NUM3 307 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 BIRC6Q9NR09 4857 aa9.49□□□□□ -0.89
TSC2-220ENST00000568238 NUPR2A6NF83 97 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 RPL29P47914 159 aaKnown RBP9.48□□□□□ -0.89
TSC2-220ENST00000568238 PLP1P60201 277 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 PATE2Q6UY27 113 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 Q6ZRG5 221 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 TCTE3Q8IZS6 198 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 STXBP6Q8NFX7 210 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 RSG1Q9BU20 258 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 SLC25A39Q9BZJ4 359 aaPredicted RBP9.48□□□□□ -0.89
TSC2-220ENST00000568238 CSTL1Q9H114 145 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 ARV1Q9H2C2 271 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 MS4A6AQ9H2W1 248 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 KCNIP2Q9NS61 270 aa9.48□□□□□ -0.89
TSC2-220ENST00000568238 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 HELTA6NFD8 242 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 C17orf112F2Z3M2 114 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 H3BRN7 92 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 DNASE2O00115 360 aaPredicted RBP9.47□□□□□ -0.89
TSC2-220ENST00000568238 ATF4P18848 351 aaPredicted RBP9.47□□□□□ -0.89
TSC2-220ENST00000568238 CD300CQ08708 224 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 ZNF266Q14584 549 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 GCSAMLQ5JQS6 135 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 PXDC1Q5TGL8 231 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 C10orf113Q5VZT2 155 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 SIGLEC15Q6ZMC9 328 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 OR8I2Q8N0Y5 310 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 TMEM37Q8WXS4 190 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 SHANK2-AS3Q9BTD1 123 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
TSC2-220ENST00000568238 RFNGQ9Y644 331 aa9.47□□□□□ -0.89
TSC2-220ENST00000568238 DNAH6Q9C0G6 4158 aa9.46□□□□□ -0.89
TSC2-220ENST00000568238 ELOA3CA0A087WX78 387 aaPredicted RBP9.46□□□□□ -0.9
TSC2-220ENST00000568238 S100A7P31151 101 aa9.46□□□□□ -0.9
TSC2-220ENST00000568238 C1orf194Q5T5A4 169 aa9.46□□□□□ -0.9
TSC2-220ENST00000568238 RPL7L1Q6DKI1 246 aaKnown RBP9.46□□□□□ -0.9
TSC2-220ENST00000568238 LINC00305Q7Z4B0 112 aa9.46□□□□□ -0.9
TSC2-220ENST00000568238 HSD17B11Q8NBQ5 300 aa9.46□□□□□ -0.9
TSC2-220ENST00000568238 OR1L4Q8NGR5 311 aa9.46□□□□□ -0.9
TSC2-220ENST00000568238 GATAD1Q8WUU5 269 aa9.46□□□□□ -0.9
TSC2-220ENST00000568238 PFDN5Q99471 154 aa9.46□□□□□ -0.9
TSC2-220ENST00000568238 SLC25A32Q9H2D1 315 aa9.46□□□□□ -0.9
TSC2-220ENST00000568238 DNAJC4Q9NNZ3 241 aa9.46□□□□□ -0.9
TSC2-220ENST00000568238 AGRNO00468 2067 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 BORCS7-ASMTA0A0B4J1R7 106 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 HMSDA8MTL9 139 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 CA1P00915 261 aaPredicted RBP9.45□□□□□ -0.9
TSC2-220ENST00000568238 CXCL2P19875 107 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 DEFB131AP59861 70 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 FFAR4Q5NUL3 377 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 MORN5Q5VZ52 161 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 S100A7AQ86SG5 101 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 KCNRGQ8N5I3 272 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 FAM24BQ8N5W8 94 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 LINC00476Q8WZB0 136 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
TSC2-220ENST00000568238 C1QBP02746 253 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms