RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 SLC39A9Q9NUM3 307 aa5.88□□□□□ -1.47
SMG1-214ENST00000568038 UFC1Q9Y3C8 167 aa5.88□□□□□ -1.47
SMG1-214ENST00000568038 PXMP4Q9Y6I8 212 aa5.88□□□□□ -1.47
SMG1-214ENST00000568038 NIPBLQ6KC79 2804 aaeCLIP5.88□□□□□ -1.47
SMG1-214ENST00000568038 IGHV3OR16-13A0A075B7E8 117 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 IGHV3-74A0A0B4J1X5 117 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 IGHV3-66A0A0C4DH42 116 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 LGALS9O00182 355 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 CFDP00746 253 aaPredicted RBP5.87□□□□□ -1.47
SMG1-214ENST00000568038 OR5G3P0C626 314 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 C4BPBP20851 252 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 NPPCP23582 126 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 ELLP55199 621 aaPredicted RBP5.87□□□□□ -1.47
SMG1-214ENST00000568038 FFAR4Q5NUL3 377 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 Q6ZRG5 221 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 PPP1R14BQ96C90 147 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 METTL26Q96S19 204 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 GINS3Q9BRX5 216 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 SLC25A32Q9H2D1 315 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 DAZ1Q9NQZ3 744 aaKnown RBP5.87□□□□□ -1.47
SMG1-214ENST00000568038 KCNIP2Q9NS61 270 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 PEMTQ9UBM1 199 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 SELENOKQ9Y6D0 94 aa5.87□□□□□ -1.47
SMG1-214ENST00000568038 TMEM213A2RRL7 107 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 C2orf70A6NJV1 201 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 K7EMT4 169 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 COX7A2P2O60397 106 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 HYPMO75409 117 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 APOHP02749 345 aaPredicted RBP5.86□□□□□ -1.47
SMG1-214ENST00000568038 CSN3P07498 182 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 TPT1P13693 172 aaKnown RBP5.86□□□□□ -1.47
SMG1-214ENST00000568038 FOLR2P14207 255 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 PLP1P60201 277 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 EIF5AP63241 154 aaKnown RBP5.86□□□□□ -1.47
SMG1-214ENST00000568038 GCSAMLQ5JQS6 135 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 PATE2Q6UY27 113 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 IL34Q6ZMJ4 242 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 SLC51BQ86UW2 128 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 BAP18Q8IXM2 172 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 OR2G3Q8NGZ4 309 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 GNPNAT1Q96EK6 184 aaPredicted RBP5.86□□□□□ -1.47
SMG1-214ENST00000568038 UHRF2Q96PU4 802 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 ELOVL1Q9BW60 279 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 ARV1Q9H2C2 271 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 VSIRQ9H7M9 311 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 DNAJC4Q9NNZ3 241 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 MRPL27Q9P0M9 148 aaKnown RBP5.86□□□□□ -1.47
SMG1-214ENST00000568038 RABAC1Q9UI14 185 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 HIGD1AQ9Y241 93 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 TIMM9Q9Y5J7 89 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 FBN1P35555 2871 aaKnown RBP5.86□□□□□ -1.47
SMG1-214ENST00000568038 ATRQ13535 2644 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 WNK1Q9H4A3 2382 aa5.86□□□□□ -1.47
SMG1-214ENST00000568038 NF1P21359 2839 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 IGHV7-4-1A0A0J9YVY3 117 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 A8MWP6 167 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 SEC14L6B5MCN3 397 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 SAP30O75446 220 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 SPP1P10451 314 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 CBLN1P23435 193 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 CRYBB3P26998 211 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 RAB2AP61019 212 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 ACOT6Q3I5F7 207 aaPredicted RBP5.85□□□□□ -1.47
SMG1-214ENST00000568038 AKR1C8PQ5T2L2 129 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 PXDC1Q5TGL8 231 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 C10orf113Q5VZT2 155 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 LEMD1Q68G75 181 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 ADAMTSL5Q6ZMM2 481 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 LINC00305Q7Z4B0 112 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 OR1L4Q8NGR5 311 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 STOML3Q8TAV4 291 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 DYNLRB2Q8TF09 96 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 TMED6Q8WW62 240 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 TMEM37Q8WXS4 190 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 NARS2Q96I59 477 aaKnown RBP5.85□□□□□ -1.47
SMG1-214ENST00000568038 PSMG3Q9BT73 122 aaPredicted RBP5.85□□□□□ -1.47
SMG1-214ENST00000568038 RHPN1-AS1Q9BWJ2 59 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 SLC25A22Q9H936 323 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 SMPXQ9UHP9 88 aa5.85□□□□□ -1.47
SMG1-214ENST00000568038 TRAV5A0A0B4J249 113 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 A0A1W2PPV4 95 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 CHEK1O14757 476 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 EIF3GO75821 320 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMG1-214ENST00000568038 SEC11BP0C7V7 166 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 C8orf88P0DMB2 117 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 IGLL1P15814 213 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 M6PRP20645 277 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 SERF2P84101 59 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 FAM78BQ5VT40 261 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 MORN5Q5VZ52 161 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 SPATA31B1PQ5VZV4 182 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 FAM122CQ6P4D5 195 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 WFDC9Q8NEX5 89 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 OR10G4Q8NGN3 311 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 OR10G9Q8NGN4 311 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 OR10G7Q8NGN6 311 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 GATAD1Q8WUU5 269 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 RAB24Q969Q5 203 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 MARC2Q969Z3 335 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 GRAMD2BQ96HH9 432 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms