RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 NPCDR1Q9BY65 106 aa9.42□□□□□ -0.9
GINS3-209ENST00000567909 PXMP4Q9Y6I8 212 aa9.42□□□□□ -0.9
GINS3-209ENST00000567909 KNCNA6PVL3 124 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 MPDU1O75352 247 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 RPL29P47914 159 aaKnown RBP9.41□□□□□ -0.9
GINS3-209ENST00000567909 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
GINS3-209ENST00000567909 PRR20EP86478 221 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 PRR20CP86479 221 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 PRR20DP86480 221 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 PRR20BP86481 221 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 PRR20AP86496 221 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 FGL1Q08830 312 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 LINC00305Q7Z4B0 112 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 ZNF709Q8N972 641 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 TMEM37Q8WXS4 190 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 LINC00052Q96N35 136 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 SPATA25Q9BR10 227 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 WDR61Q9GZS3 305 aaKnown RBP9.41□□□□□ -0.9
GINS3-209ENST00000567909 RETNQ9HD89 108 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 SLC39A9Q9NUM3 307 aa9.41□□□□□ -0.9
GINS3-209ENST00000567909 hCG_2014768A0A024R1R8 64 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 ELOA3CA0A087WX78 387 aaPredicted RBP9.4□□□□□ -0.9
GINS3-209ENST00000567909 FXYD6-FXYD2A0A087WZ82 144 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 RPL7P18124 248 aaKnown RBP9.4□□□□□ -0.9
GINS3-209ENST00000567909 ATF4P18848 351 aaPredicted RBP9.4□□□□□ -0.9
GINS3-209ENST00000567909 ID1P41134 155 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 APOC4P55056 127 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 AKAP14Q86UN6 197 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 STHQ8IWL8 128 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 OR2T35Q8NGX2 323 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 GPR82Q96P67 336 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 DNAJC4Q9NNZ3 241 aa9.4□□□□□ -0.9
GINS3-209ENST00000567909 IFNA5P01569 189 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 MEOX2P50222 304 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 ACTL10Q5JWF8 245 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 MORN5Q5VZ52 161 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 SCGB1C1Q8TD33 95 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 C16orf92Q96LL3 132 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 PFDN5Q99471 154 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 WFDC1Q9HC57 220 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 RNF24Q9Y225 148 aa9.39□□□□□ -0.91
GINS3-209ENST00000567909 C17orf112F2Z3M2 114 aa9.38□□□□□ -0.91
GINS3-209ENST00000567909 ISLRO14498 428 aa9.38□□□□□ -0.91
GINS3-209ENST00000567909 SOCS3O14543 225 aa9.38□□□□□ -0.91
GINS3-209ENST00000567909 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
GINS3-209ENST00000567909 PSMB3P49720 205 aa9.38□□□□□ -0.91
GINS3-209ENST00000567909 GCSAMLQ5JQS6 135 aa9.38□□□□□ -0.91
GINS3-209ENST00000567909 INO80EQ8NBZ0 244 aaPredicted RBP9.38□□□□□ -0.91
GINS3-209ENST00000567909 SEPSECSQ9HD40 501 aaKnown RBP9.38□□□□□ -0.91
GINS3-209ENST00000567909 KCNIP2Q9NS61 270 aa9.38□□□□□ -0.91
GINS3-209ENST00000567909 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 KIR2DL5BA0A0G2JN68 375 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 KIR2DL5BA0A0G2JPC4 375 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 A0A1B0GVG6 124 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 DEFB1P60022 68 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 SAMD13Q5VXD3 122 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 BPIFA4PQ86YQ2 179 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 KIR2DL5AQ8N109 375 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 KIR2DL5BQ8NHK3 375 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 LRRC20Q8TCA0 184 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 GATAD1Q8WUU5 269 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 C17orf77Q96MU5 243 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 AQP10Q96PS8 301 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 CSTL1Q9H114 145 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 STAB2Q8WWQ8 2551 aa9.37□□□□□ -0.91
GINS3-209ENST00000567909 SMLR1H3BR10 107 aa9.36□□□□□ -0.91
GINS3-209ENST00000567909 UBE2CO00762 179 aa9.36□□□□□ -0.91
GINS3-209ENST00000567909 FFAR4Q5NUL3 377 aa9.36□□□□□ -0.91
GINS3-209ENST00000567909 C20orf173Q96LM9 149 aa9.36□□□□□ -0.91
GINS3-209ENST00000567909 RFNGQ9Y644 331 aa9.36□□□□□ -0.91
GINS3-209ENST00000567909 A0A087X0K7 114 aa9.35□□□□□ -0.91
GINS3-209ENST00000567909 G3V3Q6 166 aa9.35□□□□□ -0.91
GINS3-209ENST00000567909 H3BTX0 84 aa9.35□□□□□ -0.91
GINS3-209ENST00000567909 MRPS12O15235 138 aaKnown RBP9.35□□□□□ -0.91
GINS3-209ENST00000567909 CA1P00915 261 aaPredicted RBP9.35□□□□□ -0.91
GINS3-209ENST00000567909 IGKV3-20P01619 116 aa9.35□□□□□ -0.91
GINS3-209ENST00000567909 GDF5OSQ5U4N7 250 aa9.35□□□□□ -0.91
GINS3-209ENST00000567909 FAM78BQ5VT40 261 aa9.35□□□□□ -0.91
GINS3-209ENST00000567909 TRPT1Q86TN4 253 aaKnown RBP9.35□□□□□ -0.91
GINS3-209ENST00000567909 RNF182Q8N6D2 247 aa9.35□□□□□ -0.91
GINS3-209ENST00000567909 RPRMQ9NS64 109 aa9.35□□□□□ -0.91
GINS3-209ENST00000567909 TNFSF18Q9UNG2 199 aa9.35□□□□□ -0.91
GINS3-209ENST00000567909 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 RNF222A6NCQ9 220 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 F6UB75 175 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 H3BMM0 161 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 SPRY2O43597 315 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 HLA-DMBP28068 263 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 ZNF266Q14584 549 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 SPATA31B1PQ5VZV4 182 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 Q6ZWC4 215 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 MIR17HGQ75NE6 70 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 TCTE3Q8IZS6 198 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 WWC2-AS2Q96NR7 200 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 OVOL2Q9BRP0 275 aa9.34□□□□□ -0.91
GINS3-209ENST00000567909 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms