RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TOMM40O96008 361 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 IFNA1P01562 189 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 NPSP0C0P6 89 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 C8orf88P0DMB2 117 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 ORM2P19652 201 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 CRIP2P52943 208 aaPredicted RBP4.43□□□□□ -1.7
SF3B3-210ENST00000567654 PLP1P60201 277 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 LYZP61626 148 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 SELENOTP62341 195 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 RHOGP84095 191 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 USF2Q15853 346 aaPredicted RBP4.43□□□□□ -1.7
SF3B3-210ENST00000567654 C10orf113Q5VZT2 155 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 CST9LP1Q5W188 147 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 C10orf99Q6UWK7 81 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 LINC00305Q7Z4B0 112 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 ZNF491Q8N8L2 437 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 RPUSD4Q96CM3 377 aaKnown RBP4.43□□□□□ -1.7
SF3B3-210ENST00000567654 FXYD5Q96DB9 178 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 MS4A10Q96PG2 267 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 CHRDL1Q9BU40 450 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 PARLQ9H300 379 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 DNAJC4Q9NNZ3 241 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 C21orf62Q9NYP8 219 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 TECRQ9NZ01 308 aaKnown RBP4.43□□□□□ -1.7
SF3B3-210ENST00000567654 TLN2Q9Y4G6 2542 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 CREBBPQ92793 2442 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 TRBV20OR9-2A0A075B6H5 130 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 IGHV3OR16-8A0A075B7F1 116 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 TRAV41A0A0B4J266 112 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 IGHV3-35A0A0C4DH35 117 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 WI2-2373I1.2A0A1W2PRP0 233 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 OR2T8A6NH00 312 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 H3BRN7 92 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 M0R036 132 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 MRPS12O15235 138 aaKnown RBP4.42□□□□□ -1.7
SF3B3-210ENST00000567654 GNG7O60262 68 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 IGHG2P01859 326 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 CTSGP08311 255 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 PRB4P10163 310 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-210ENST00000567654 GP9P14770 177 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 GPR183P32249 361 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 IER3P46695 156 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 MFAP4P55083 255 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 BPIFB3P59826 476 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 RPL23P62829 140 aaKnown RBP4.42□□□□□ -1.7
SF3B3-210ENST00000567654 CFHR3Q02985 330 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 ZNF674Q2M3X9 581 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 C15orf32Q32M92 178 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 Q56UQ5 140 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 CYB5R2Q6BCY4 276 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 RBMS3Q6XE24 437 aaKnown RBP4.42□□□□□ -1.7
SF3B3-210ENST00000567654 C9orf139Q6ZV77 190 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 C16orf82Q7Z2V1 217 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 OR1L6Q8NGR2 347 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 OR1L4Q8NGR5 311 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 ZNF502Q8TBZ5 544 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 ISOC2Q96AB3 205 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 TVP23CQ96ET8 276 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 YPEL4Q96NS1 127 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 PFDN5Q99471 154 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 SDF2L1Q9HCN8 221 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 RPS10P5Q9NQ39 176 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 MRPL27Q9P0M9 148 aaKnown RBP4.42□□□□□ -1.7
SF3B3-210ENST00000567654 ACANP16112 2415 aa4.42□□□□□ -1.7
SF3B3-210ENST00000567654 SONP18583 2426 aaKnown RBP4.42□□□□□ -1.7
SF3B3-210ENST00000567654 CCDC168Q8NDH2 2452 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 UNC79Q9P2D8 2635 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 PPP5D1E7EU14 171 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 TMEM250H0YL14 139 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 HYPMO75409 117 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 NDUFB4O95168 129 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 TRBV12-3P01733 135 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 IGF1P05019 195 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 IL4P05112 153 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 RD3LP0DJH9 198 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 FCGR2BP31994 310 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-210ENST00000567654 MYCNOSP40205 109 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 UBE2L3P68036 154 aaKnown RBP4.41□□□□□ -1.7
SF3B3-210ENST00000567654 ZNF343Q6P1L6 599 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 PQLC2Q6ZP29 291 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 Q71RC1 249 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-210ENST00000567654 VN1R17PQ8TDU5 208 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 NTN5Q8WTR8 489 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-210ENST00000567654 C11orf52Q96A22 123 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 RNF125Q96EQ8 232 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 C17orf77Q96MU5 243 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 DUX5Q96PT3 197 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 RNF2Q99496 336 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 FOXC2Q99958 501 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 SMIM7Q9BQ49 75 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 PAXXQ9BUH6 204 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 C19orf24Q9BVV8 132 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 ELOVL1Q9BW60 279 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 SLC25A39Q9BZJ4 359 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-210ENST00000567654 OR51M1Q9H341 326 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 TMEM167BQ9NRX6 74 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 ZNF586Q9NXT0 402 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 HIGD1AQ9Y241 93 aa4.41□□□□□ -1.7
SF3B3-210ENST00000567654 MYO9AB2RTY4 2548 aa4.4□□□□□ -1.7
SF3B3-210ENST00000567654 CLPSL1A2RUU4 121 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms