RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 LINC00052Q96N35 136 aa11.28□□□□□ -0.6
COMMD4-219ENST00000567399 RBMY1BA6NDE4 496 aaKnown RBP11.27□□□□□ -0.61
COMMD4-219ENST00000567399 RBMY1EA6NEQ0 496 aaKnown RBP11.27□□□□□ -0.61
COMMD4-219ENST00000567399 RBMY1DP0C7P1 496 aaKnown RBP11.27□□□□□ -0.61
COMMD4-219ENST00000567399 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
COMMD4-219ENST00000567399 MEOX2P50222 304 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 PRR20EP86478 221 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 PRR20CP86479 221 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 PRR20DP86480 221 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 PRR20BP86481 221 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 PRR20AP86496 221 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 PSMG4Q5JS54 123 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 PATE2Q6UY27 113 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 FAM24BQ8N5W8 94 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 LRRC20Q8TCA0 184 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 CHAC2Q8WUX2 184 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 C16orf92Q96LL3 132 aa11.27□□□□□ -0.61
COMMD4-219ENST00000567399 APOC4P55056 127 aa11.26□□□□□ -0.61
COMMD4-219ENST00000567399 ZNF124Q15973 351 aa11.26□□□□□ -0.61
COMMD4-219ENST00000567399 HAGHQ16775 308 aa11.26□□□□□ -0.61
COMMD4-219ENST00000567399 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
COMMD4-219ENST00000567399 STHQ8IWL8 128 aa11.26□□□□□ -0.61
COMMD4-219ENST00000567399 TMEM37Q8WXS4 190 aa11.26□□□□□ -0.61
COMMD4-219ENST00000567399 AQP10Q96PS8 301 aa11.26□□□□□ -0.61
COMMD4-219ENST00000567399 ZNF266Q14584 549 aa11.25□□□□□ -0.61
COMMD4-219ENST00000567399 BPIFA4PQ86YQ2 179 aa11.25□□□□□ -0.61
COMMD4-219ENST00000567399 GATAD1Q8WUU5 269 aa11.25□□□□□ -0.61
COMMD4-219ENST00000567399 CITED4Q96RK1 184 aa11.25□□□□□ -0.61
COMMD4-219ENST00000567399 SEPSECSQ9HD40 501 aaKnown RBP11.25□□□□□ -0.61
COMMD4-219ENST00000567399 SMLR1H3BR10 107 aa11.24□□□□□ -0.61
COMMD4-219ENST00000567399 PSMB3P49720 205 aa11.24□□□□□ -0.61
COMMD4-219ENST00000567399 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
COMMD4-219ENST00000567399 TNFSF18Q9UNG2 199 aa11.24□□□□□ -0.61
COMMD4-219ENST00000567399 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
COMMD4-219ENST00000567399 ISLRO14498 428 aa11.23□□□□□ -0.61
COMMD4-219ENST00000567399 ARPC5O15511 151 aa11.23□□□□□ -0.61
COMMD4-219ENST00000567399 ACTL10Q5JWF8 245 aa11.23□□□□□ -0.61
COMMD4-219ENST00000567399 FFAR4Q5NUL3 377 aa11.23□□□□□ -0.61
COMMD4-219ENST00000567399 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
COMMD4-219ENST00000567399 SPATA25Q9BR10 227 aa11.23□□□□□ -0.61
COMMD4-219ENST00000567399 U3KQK5 164 aa11.23□□□□□ -0.61
COMMD4-219ENST00000567399 hCG_2014768A0A024R1R8 64 aa11.22□□□□□ -0.61
COMMD4-219ENST00000567399 BORCS7-ASMTA0A0B4J1R7 106 aa11.22□□□□□ -0.61
COMMD4-219ENST00000567399 TRAV5A0A0B4J249 113 aa11.22□□□□□ -0.61
COMMD4-219ENST00000567399 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.22□□□□□ -0.61
COMMD4-219ENST00000567399 LINC00322Q6ZN03 302 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-219ENST00000567399 Q6ZNX1 250 aa11.22□□□□□ -0.61
COMMD4-219ENST00000567399 PARD6GQ9BYG4 376 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-219ENST00000567399 MFFQ9GZY8 342 aa11.22□□□□□ -0.61
COMMD4-219ENST00000567399 RPRMQ9NS64 109 aa11.22□□□□□ -0.61
COMMD4-219ENST00000567399 DNAH3Q8TD57 4116 aa11.22□□□□□ -0.61
COMMD4-219ENST00000567399 UBE2CO00762 179 aa11.21□□□□□ -0.61
COMMD4-219ENST00000567399 SNRPCP09234 159 aaKnown RBP11.21□□□□□ -0.61
COMMD4-219ENST00000567399 GCSAMLQ5JQS6 135 aa11.21□□□□□ -0.61
COMMD4-219ENST00000567399 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
COMMD4-219ENST00000567399 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.61
COMMD4-219ENST00000567399 HSD17B11Q8NBQ5 300 aa11.21□□□□□ -0.61
COMMD4-219ENST00000567399 CSTL1Q9H114 145 aa11.21□□□□□ -0.61
COMMD4-219ENST00000567399 KIR2DL5BA0A0G2JN68 375 aa11.2□□□□□ -0.62
COMMD4-219ENST00000567399 KIR2DL5BA0A0G2JPC4 375 aa11.2□□□□□ -0.62
COMMD4-219ENST00000567399 ACOT6Q3I5F7 207 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-219ENST00000567399 KIR2DL5AQ8N109 375 aa11.2□□□□□ -0.62
COMMD4-219ENST00000567399 KIR2DL5BQ8NHK3 375 aa11.2□□□□□ -0.62
COMMD4-219ENST00000567399 RCHY1Q96PM5 261 aa11.2□□□□□ -0.62
COMMD4-219ENST00000567399 TM2D3Q9BRN9 247 aa11.2□□□□□ -0.62
COMMD4-219ENST00000567399 MRPL32Q9BYC8 188 aaKnown RBP11.2□□□□□ -0.62
COMMD4-219ENST00000567399 A0A087X0K7 114 aa11.19□□□□□ -0.62
COMMD4-219ENST00000567399 RNF222A6NCQ9 220 aa11.19□□□□□ -0.62
COMMD4-219ENST00000567399 SOCS3O14543 225 aa11.19□□□□□ -0.62
COMMD4-219ENST00000567399 TAAR5O14804 337 aa11.19□□□□□ -0.62
COMMD4-219ENST00000567399 RHOBP62745 196 aa11.19□□□□□ -0.62
COMMD4-219ENST00000567399 IGFL4Q6B9Z1 124 aa11.19□□□□□ -0.62
COMMD4-219ENST00000567399 LCN15Q6UWW0 184 aa11.19□□□□□ -0.62
COMMD4-219ENST00000567399 ZNF738Q8NE65 137 aa11.19□□□□□ -0.62
COMMD4-219ENST00000567399 TIMM9Q9Y5J7 89 aa11.19□□□□□ -0.62
COMMD4-219ENST00000567399 A0A1W2PPV4 95 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 G3V3Q6 166 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 H3BTX0 84 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 CA1P00915 261 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-219ENST00000567399 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 NUTF2P61970 127 aaKnown RBP11.18□□□□□ -0.62
COMMD4-219ENST00000567399 GUK1Q16774 197 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 RPL7L1Q6DKI1 246 aaKnown RBP11.18□□□□□ -0.62
COMMD4-219ENST00000567399 FOXI2Q6ZQN5 318 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 MIR17HGQ75NE6 70 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 OR4B1Q8NGF8 309 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 C17orf77Q96MU5 243 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 SLC50A1Q9BRV3 221 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 RETNQ9HD89 108 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 FUT9Q9Y231 359 aa11.18□□□□□ -0.62
COMMD4-219ENST00000567399 OR7C2O60412 319 aa11.17□□□□□ -0.62
COMMD4-219ENST00000567399 JTBO76095 146 aa11.17□□□□□ -0.62
COMMD4-219ENST00000567399 SPP1P10451 314 aa11.17□□□□□ -0.62
COMMD4-219ENST00000567399 CXCL2P19875 107 aa11.17□□□□□ -0.62
COMMD4-219ENST00000567399 ATP6V0CP27449 155 aa11.17□□□□□ -0.62
COMMD4-219ENST00000567399 TAS2R45P59539 299 aa11.17□□□□□ -0.62
COMMD4-219ENST00000567399 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
COMMD4-219ENST00000567399 MORN3Q6PF18 240 aaPredicted RBP11.17□□□□□ -0.62
COMMD4-219ENST00000567399 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
COMMD4-219ENST00000567399 RNF182Q8N6D2 247 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms