RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 SHANK2-AS3Q9BTD1 123 aa13.55□□□□□ -0.24
IFT140-208ENST00000566818 SCRT1Q9BWW7 348 aa13.55□□□□□ -0.24
IFT140-208ENST00000566818 SLC25A39Q9BZJ4 359 aaPredicted RBP13.55□□□□□ -0.24
IFT140-208ENST00000566818 TRAV6A0A075B6T7 132 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 TMEM189A5PLL7 270 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 SMIM9A6NGZ8 99 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 FAM25EA8MYX2 175 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 IGLL5B9A064 214 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 CCSO14618 274 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 MBPP02686 304 aaPredicted RBP13.54□□□□□ -0.24
IFT140-208ENST00000566818 OR5G3P0C626 314 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 RPL7P18124 248 aaKnown RBP13.54□□□□□ -0.24
IFT140-208ENST00000566818 FXYD7P58549 80 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 PLP1P60201 277 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 FAM78BQ5VT40 261 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 LINC00299Q6ZSB3 139 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 Q6ZTC4 211 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 ZNF546Q86UE3 836 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 ZNF431Q8TF32 576 aaPredicted RBP13.54□□□□□ -0.24
IFT140-208ENST00000566818 GGACTQ9BVM4 153 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 GOLT1BQ9Y3E0 138 aa13.54□□□□□ -0.24
IFT140-208ENST00000566818 ZNF705FA8MVS1 300 aaPredicted RBP13.53□□□□□ -0.24
IFT140-208ENST00000566818 K7EPK0 472 aa13.53□□□□□ -0.24
IFT140-208ENST00000566818 ZNF705DP0CH99 300 aaPredicted RBP13.53□□□□□ -0.24
IFT140-208ENST00000566818 ZNF705BP0CI00 300 aaPredicted RBP13.53□□□□□ -0.24
IFT140-208ENST00000566818 PXDC1Q5TGL8 231 aa13.53□□□□□ -0.24
IFT140-208ENST00000566818 ZNF709Q8N972 641 aa13.53□□□□□ -0.24
IFT140-208ENST00000566818 IGHV3OR16-12A0A075B7B8 117 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 C7orf66A4D0T2 115 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 C5orf51A6NDU8 294 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 F6UB75 175 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 FGL1Q08830 312 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 MZT2BQ6NZ67 158 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 S100ZQ8WXG8 99 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 C20orf173Q96LM9 149 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 SEC22CQ9BRL7 303 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 ARL6Q9H0F7 186 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 SLC35B3Q9H1N7 401 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 CELA1Q9UNI1 258 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 LSM5Q9Y4Y9 91 aaKnown RBP13.52□□□□□ -0.25
IFT140-208ENST00000566818 RFNGQ9Y644 331 aa13.52□□□□□ -0.25
IFT140-208ENST00000566818 TEX48A0A1B0GUV7 120 aa13.51□□□□□ -0.25
IFT140-208ENST00000566818 FAM240BA0A1B0GVZ2 78 aa13.51□□□□□ -0.25
IFT140-208ENST00000566818 GOSR2O14653 212 aa13.51□□□□□ -0.25
IFT140-208ENST00000566818 DUSP14O95147 198 aaKnown RBP13.51□□□□□ -0.25
IFT140-208ENST00000566818 H2AFB2P0C5Z0 115 aa13.51□□□□□ -0.25
IFT140-208ENST00000566818 BCAP31P51572 246 aa13.51□□□□□ -0.25
IFT140-208ENST00000566818 GSG1LQ6UXU4 331 aa13.51□□□□□ -0.25
IFT140-208ENST00000566818 C12orf45Q8N5I9 185 aaPredicted RBP13.51□□□□□ -0.25
IFT140-208ENST00000566818 DEDDO75618 318 aa13.5□□□□□ -0.25
IFT140-208ENST00000566818 AMBPP02760 352 aa13.5□□□□□ -0.25
IFT140-208ENST00000566818 PVALBP20472 110 aaPredicted RBP13.5□□□□□ -0.25
IFT140-208ENST00000566818 ZNF738Q8NE65 137 aa13.5□□□□□ -0.25
IFT140-208ENST00000566818 C17orf77Q96MU5 243 aa13.5□□□□□ -0.25
IFT140-208ENST00000566818 UHRF2Q96PU4 802 aa13.5□□□□□ -0.25
IFT140-208ENST00000566818 ARV1Q9H2C2 271 aa13.5□□□□□ -0.25
IFT140-208ENST00000566818 KMT2AQ03164 3969 aa13.5□□□□□ -0.25
IFT140-208ENST00000566818 A0A087X0K7 114 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 A8MTW9 85 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 HBE1P02100 147 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 SPART-AS1P0CW21 52 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 CAV2P51636 162 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 C12orf74Q32Q52 190 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 LRRC20Q8TCA0 184 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 C2orf50Q96LR7 162 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 RNF126Q9BV68 326 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 APLNQ9ULZ1 77 aa13.49□□□□□ -0.25
IFT140-208ENST00000566818 IGHV4-4A0A075B6R2 117 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 DEFB131BA0A096LNP1 70 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 AGPAT2O15120 278 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 COX7A2P2O60397 106 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 EMP1P54849 157 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 S100A10P60903 97 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 ARL16Q0P5N6 197 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 RAB31Q13636 194 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 RPP25LQ8N5L8 163 aaKnown RBP13.48□□□□□ -0.25
IFT140-208ENST00000566818 RNF182Q8N6D2 247 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 TMEM208Q9BTX3 173 aa13.48□□□□□ -0.25
IFT140-208ENST00000566818 TRAV8-2A0A0B4J237 113 aa13.47□□□□□ -0.25
IFT140-208ENST00000566818 INSP01308 110 aa13.47□□□□□ -0.25
IFT140-208ENST00000566818 CXCL2P19875 107 aa13.47□□□□□ -0.25
IFT140-208ENST00000566818 CNN1P51911 297 aaKnown RBP13.47□□□□□ -0.25
IFT140-208ENST00000566818 ASAH1Q13510 395 aa13.47□□□□□ -0.25
IFT140-208ENST00000566818 ZNF767PQ75MW2 155 aa13.47□□□□□ -0.25
IFT140-208ENST00000566818 IGF2BP2-AS1Q96M15 143 aa13.47□□□□□ -0.25
IFT140-208ENST00000566818 DNAH6Q9C0G6 4158 aa13.47□□□□□ -0.25
IFT140-208ENST00000566818 RRN3P1Q2M238 152 aa13.46□□□□□ -0.25
IFT140-208ENST00000566818 IGFL4Q6B9Z1 124 aa13.46□□□□□ -0.25
IFT140-208ENST00000566818 AMTNQ6UX39 209 aa13.46□□□□□ -0.25
IFT140-208ENST00000566818 PATE2Q6UY27 113 aa13.46□□□□□ -0.25
IFT140-208ENST00000566818 LINC00305Q7Z4B0 112 aa13.46□□□□□ -0.25
IFT140-208ENST00000566818 MGST2Q99735 147 aa13.46□□□□□ -0.25
IFT140-208ENST00000566818 LOC102723971A0A1B0GUV8 181 aa13.45□□□□□ -0.26
IFT140-208ENST00000566818 CXCL3P19876 107 aa13.45□□□□□ -0.26
IFT140-208ENST00000566818 CAMLGP49069 296 aa13.45□□□□□ -0.26
IFT140-208ENST00000566818 LCN15Q6UWW0 184 aa13.45□□□□□ -0.26
IFT140-208ENST00000566818 STX12Q86Y82 276 aa13.45□□□□□ -0.26
IFT140-208ENST00000566818 C1orf158Q8N1D5 194 aa13.45□□□□□ -0.26
IFT140-208ENST00000566818 OR11H7Q8NGC8 314 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms