RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 FAM78BQ5VT40 261 aa10.53□□□□□ -0.72
FANCA-220ENST00000566409 OR4B1Q8NGF8 309 aa10.53□□□□□ -0.72
FANCA-220ENST00000566409 C16orf92Q96LL3 132 aa10.53□□□□□ -0.72
FANCA-220ENST00000566409 UHRF2Q96PU4 802 aa10.53□□□□□ -0.72
FANCA-220ENST00000566409 SHANK2-AS3Q9BTD1 123 aa10.53□□□□□ -0.72
FANCA-220ENST00000566409 NUDT15Q9NV35 164 aa10.53□□□□□ -0.72
FANCA-220ENST00000566409 APLNQ9ULZ1 77 aa10.53□□□□□ -0.72
FANCA-220ENST00000566409 A8MTW9 85 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 C11orf94C9JXX5 98 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 FNDC10F2Z333 226 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 K7EPK0 472 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 LINC00869P0C866 280 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 MEOX2P50222 304 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 PRR20EP86478 221 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 PRR20CP86479 221 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 PRR20DP86480 221 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 PRR20BP86481 221 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 PRR20AP86496 221 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 C12orf74Q32Q52 190 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 SPATA31B1PQ5VZV4 182 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 ZNF767PQ75MW2 155 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 OR10P1Q8NGE3 313 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 ZNF431Q8TF32 576 aaPredicted RBP10.52□□□□□ -0.73
FANCA-220ENST00000566409 NEU1Q99519 415 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 CCDC32Q9BV29 185 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 C11orf1Q9H5F2 150 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 NPVFQ9HCQ7 196 aa10.52□□□□□ -0.73
FANCA-220ENST00000566409 IGLL5B9A064 214 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 HYPMO75409 117 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 SELENOTP62341 195 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 PSG9Q00887 426 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 SLC38A11Q08AI6 406 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 SAMD13Q5VXD3 122 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 EBLN2Q6P2I7 272 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 AMTNQ6UX39 209 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 C1orf158Q8N1D5 194 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 RNF182Q8N6D2 247 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 GPR82Q96P67 336 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 RPRMQ9NS64 109 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 HIGD1AQ9Y241 93 aa10.51□□□□□ -0.73
FANCA-220ENST00000566409 H2AFB2P0C5Z0 115 aa10.5□□□□□ -0.73
FANCA-220ENST00000566409 OR5G3P0C626 314 aa10.5□□□□□ -0.73
FANCA-220ENST00000566409 IL15RAQ13261 267 aa10.5□□□□□ -0.73
FANCA-220ENST00000566409 TEPPQ6URK8 271 aa10.5□□□□□ -0.73
FANCA-220ENST00000566409 LINC00299Q6ZSB3 139 aa10.5□□□□□ -0.73
FANCA-220ENST00000566409 C12orf45Q8N5I9 185 aaPredicted RBP10.5□□□□□ -0.73
FANCA-220ENST00000566409 ARL6Q9H0F7 186 aa10.5□□□□□ -0.73
FANCA-220ENST00000566409 IGHV3OR16-12A0A075B7B8 117 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 TRAV10A0A0B4J240 114 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 FAM25EA8MYX2 175 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 AGPAT2O15120 278 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 MRPS12O15235 138 aaKnown RBP10.49□□□□□ -0.73
FANCA-220ENST00000566409 TCTAP57738 103 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 RAP2BP61225 183 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 FGL1Q08830 312 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 MGST2Q99735 147 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 GGACTQ9BVM4 153 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 MGAT4CQ9UBM8 478 aa10.49□□□□□ -0.73
FANCA-220ENST00000566409 LSM5Q9Y4Y9 91 aaKnown RBP10.49□□□□□ -0.73
FANCA-220ENST00000566409 FAM240BA0A1B0GVZ2 78 aa10.48□□□□□ -0.73
FANCA-220ENST00000566409 SMIM9A6NGZ8 99 aa10.48□□□□□ -0.73
FANCA-220ENST00000566409 PRB4P10163 310 aaPredicted RBP10.48□□□□□ -0.73
FANCA-220ENST00000566409 RPL7P18124 248 aaKnown RBP10.48□□□□□ -0.73
FANCA-220ENST00000566409 CNN1P51911 297 aaKnown RBP10.48□□□□□ -0.73
FANCA-220ENST00000566409 ZNF846Q147U1 533 aa10.48□□□□□ -0.73
FANCA-220ENST00000566409 C2orf50Q96LR7 162 aa10.48□□□□□ -0.73
FANCA-220ENST00000566409 ARV1Q9H2C2 271 aa10.48□□□□□ -0.73
FANCA-220ENST00000566409 IGHV4-4A0A075B6R2 117 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 A0A087X0K7 114 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 C5orf51A6NDU8 294 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 FAM24AA6NFZ4 105 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 A6NHS1 94 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 CRXO43186 299 aaPredicted RBP10.47□□□□□ -0.73
FANCA-220ENST00000566409 CST7O76096 145 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 CXCL3P19876 107 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 S100A7P31151 101 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 EMP1P54849 157 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 IFITM3Q01628 133 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 ASAH1Q13510 395 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 MORN5Q5VZ52 161 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 OR11H7Q8NGC8 314 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 TMEM37Q8WXS4 190 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
FANCA-220ENST00000566409 HECTD4Q9Y4D8 3996 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 DNAH2Q9P225 4427 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 DEFB131BA0A096LNP1 70 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 L7N2F9 121 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 GOSR2O14653 212 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 PRM2P04554 102 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 SNRPCP09234 159 aaKnown RBP10.46□□□□□ -0.73
FANCA-220ENST00000566409 VAMP2P63027 116 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 LINC00305Q7Z4B0 112 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 ZNF546Q86UE3 836 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 RFNGQ9Y644 331 aa10.46□□□□□ -0.73
FANCA-220ENST00000566409 M0R2Z0 102 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 SPART-AS1P0CW21 52 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 BCAP31P51572 246 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 CAV2P51636 162 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 RAB32Q13637 225 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 SPINK13Q1W4C9 94 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms