RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	SUB1	P53999	127 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	POLR2G	P62487	172 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	ACOT7L	Q6ZUV0	252 aa		4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	CENPS	Q8N2Z9	138 aa		4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	RPP25L	Q8N5L8	163 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	DEDD2	Q8WXF8	326 aa		4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	METTL26	Q96S19	204 aa		4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	CSTL1	Q9H114	145 aa		4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	CLEC5A	Q9NY25	188 aa		4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	RABAC1	Q9UI14	185 aa		4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	TBC1D24	Q9ULP9	559 aa		4.64	□□□□□ -1.67
TCF4-233	ENST00000566376	PCLO	Q9Y6V0	5065 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	TRAV30	A0A087WSZ9	112 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	TRAV8-2	A0A0B4J237	113 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	CCDC160	A6NGH7	325 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376		H3BMM0	161 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	WRB	O00258	174 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	CCS	O14618	274 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	SYNGR2	O43760	224 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	NOL3	O60936	208 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	DEDD	O75618	318 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	IFNA10	P01566	189 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	OR4E1	P0C645	316 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	PRB4	P10163	310 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	HLA-DRB4	P13762	266 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	KRTAP10-7	P60409	375 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	IFITM3	Q01628	133 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	OR2F1	Q13607	317 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	PSMG4	Q5JS54	123 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	MORN5	Q5VZ52	161 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	KRTAP5-11	Q6L8G4	156 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	AMTN	Q6UX39	209 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	TMEM14EP	Q6UXP3	125 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	SIGLEC15	Q6ZMC9	328 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	OR11H2	Q8NH07	326 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	OR1S1	Q8NH92	325 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	GATAD1	Q8WUU5	269 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	RAB40C	Q96S21	281 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	TRGV9	Q99603	122 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	ENY2	Q9NPA8	101 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	NRN1	Q9NPD7	142 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	TMED3	Q9Y3Q3	217 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376		U3KQ87	197 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	HLA-DRB4	X5D2U9	266 aa		4.63	□□□□□ -1.67
TCF4-233	ENST00000566376	LINC00854	A0A1B0GVQ3	168 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	HELT	A6NFD8	242 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-233	ENST00000566376		H3BRN7	92 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	ZNF705D	P0CH99	300 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	ZNF705B	P0CI00	300 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	HLA-DMB	P28068	263 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	FAU	P35544	74 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	GPX4	P36969	197 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	EIF2B2	P49770	351 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	SRPX	P78539	464 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	IL15RA	Q13261	267 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	ACTL10	Q5JWF8	245 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	OR8G2P	Q6IF36	304 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	PATE2	Q6UY27	113 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-233	ENST00000566376		Q6ZTC4	211 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	RARRES2	Q99969	163 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	SEC22C	Q9BRL7	303 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	SLC35B3	Q9H1N7	401 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	C20orf85	Q9H1P6	137 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	KCNIP3	Q9Y2W7	256 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376	ABCA13	Q86UQ4	5058 aa		4.62	□□□□□ -1.67
TCF4-233	ENST00000566376		A0A1W2PS18	150 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	CXorf65	A6NEN9	183 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	NUPR2	A6NF83	97 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	CRX	O43186	299 aa	Predicted RBP	4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	TNFRSF6B	O95407	300 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	PRM2	P04554	102 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	IFNA4	P05014	189 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	CD5	P06127	495 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	RD3L	P0DJH9	198 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	ANXA3	P12429	323 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	S100A5	P33763	92 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	FXYD7	P58549	80 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	AP3S2	P59780	193 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	LYZ	P61626	148 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	KRTAP15-1	Q3LI76	137 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	SPANXN2	Q5MJ10	180 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	ZNF767P	Q75MW2	155 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	C1orf158	Q8N1D5	194 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376		Q8WTZ3	238 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	MITD1	Q8WV92	249 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	SCGB3A2	Q96PL1	93 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	UHRF2	Q96PU4	802 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	PBDC1	Q9BVG4	233 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	SAV1	Q9H4B6	383 aa	Predicted RBP	4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	TMEM231	Q9H6L2	316 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	APLN	Q9ULZ1	77 aa		4.61	□□□□□ -1.67
TCF4-233	ENST00000566376	DNAH8	Q96JB1	4490 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms