RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 MPDU1O75352 247 aa10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 RPL29P47914 159 aaKnown RBP10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 OPCMLQ14982 345 aa10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 Q5BKY6 102 aa10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 MIC13Q5XKP0 118 aa10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 Q6ZWC4 215 aa10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 ASB13Q8WXK3 278 aa10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 ARV1Q9H2C2 271 aa10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 SEPSECSQ9HD40 501 aaKnown RBP10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 DNAH7Q8WXX0 4024 aa10.2□□□□□ -0.78
HERPUD1-210ENST00000565966 S100A7AQ86SG5 101 aa10.19□□□□□ -0.78
HERPUD1-210ENST00000565966 MUC7Q8TAX7 377 aa10.19□□□□□ -0.78
HERPUD1-210ENST00000565966 TMEM37Q8WXS4 190 aa10.19□□□□□ -0.78
HERPUD1-210ENST00000565966 C17orf77Q96MU5 243 aa10.19□□□□□ -0.78
HERPUD1-210ENST00000565966 GPR82Q96P67 336 aa10.19□□□□□ -0.78
HERPUD1-210ENST00000565966 OVOL2Q9BRP0 275 aa10.19□□□□□ -0.78
HERPUD1-210ENST00000565966 CSTL1Q9H114 145 aa10.19□□□□□ -0.78
HERPUD1-210ENST00000565966 SLC39A9Q9NUM3 307 aa10.19□□□□□ -0.78
HERPUD1-210ENST00000565966 TP53TG1Q9Y2A0 90 aa10.19□□□□□ -0.78
HERPUD1-210ENST00000565966 SOCS3O14543 225 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 COX7A2P2O60397 106 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 GALR1P47211 349 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 B2MP61769 119 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 SNRPD3P62318 126 aaKnown RBP10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 FGL1Q08830 312 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 Q6ZRG5 221 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 ATP5SQ99766 215 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 RSG1Q9BU20 258 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 NPCDR1Q9BY65 106 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 WDR61Q9GZS3 305 aaKnown RBP10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 PXMP4Q9Y6I8 212 aa10.18□□□□□ -0.78
HERPUD1-210ENST00000565966 ELOA3CA0A087WX78 387 aaPredicted RBP10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 SPRY2O43597 315 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 DEFB135Q30KP9 77 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 PSMG4Q5JS54 123 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 C10orf113Q5VZT2 155 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 LINC00305Q7Z4B0 112 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 STHQ8IWL8 128 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 RNF183Q96D59 192 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 SMIM3Q9BZL3 60 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 DNAJC4Q9NNZ3 241 aa10.17□□□□□ -0.78
HERPUD1-210ENST00000565966 KNCNA6PVL3 124 aa10.16□□□□□ -0.78
HERPUD1-210ENST00000565966 RPL7P18124 248 aaKnown RBP10.16□□□□□ -0.78
HERPUD1-210ENST00000565966 MEOX2P50222 304 aa10.16□□□□□ -0.78
HERPUD1-210ENST00000565966 MORN5Q5VZ52 161 aa10.16□□□□□ -0.78
HERPUD1-210ENST00000565966 OR1L4Q8NGR5 311 aa10.16□□□□□ -0.78
HERPUD1-210ENST00000565966 OR2T35Q8NGX2 323 aa10.16□□□□□ -0.78
HERPUD1-210ENST00000565966 WFDC1Q9HC57 220 aa10.16□□□□□ -0.78
HERPUD1-210ENST00000565966 RNF24Q9Y225 148 aa10.16□□□□□ -0.78
HERPUD1-210ENST00000565966 G3V3Q6 166 aa10.15□□□□□ -0.78
HERPUD1-210ENST00000565966 ISLRO14498 428 aa10.15□□□□□ -0.78
HERPUD1-210ENST00000565966 MRPS12O15235 138 aaKnown RBP10.15□□□□□ -0.78
HERPUD1-210ENST00000565966 ID1P41134 155 aa10.15□□□□□ -0.78
HERPUD1-210ENST00000565966 PSMB3P49720 205 aa10.15□□□□□ -0.78
HERPUD1-210ENST00000565966 AQP10Q96PS8 301 aa10.15□□□□□ -0.78
HERPUD1-210ENST00000565966 PFDN5Q99471 154 aa10.15□□□□□ -0.78
HERPUD1-210ENST00000565966 PARD6GQ9BYG4 376 aaPredicted RBP10.15□□□□□ -0.78
HERPUD1-210ENST00000565966 A0A087X0K7 114 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 TRAV5A0A0B4J249 113 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 IFNA5P01569 189 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 ATF4P18848 351 aaPredicted RBP10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 GCSAMLQ5JQS6 135 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 ACTL10Q5JWF8 245 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 SAMD13Q5VXD3 122 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 TRPT1Q86TN4 253 aaKnown RBP10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 ZNF709Q8N972 641 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 GATAD1Q8WUU5 269 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 C16orf92Q96LL3 132 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 LINC00052Q96N35 136 aa10.14□□□□□ -0.79
HERPUD1-210ENST00000565966 FXYD6-FXYD2A0A087WZ82 144 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 C17orf112F2Z3M2 114 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 CA1P00915 261 aaPredicted RBP10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 SPP1P10451 314 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 DEFB1P60022 68 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 MORN3Q6PF18 240 aaPredicted RBP10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 BPIFA4PQ86YQ2 179 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 IL17DQ8TAD2 202 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 SCGB1C1Q8TD33 95 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 C20orf173Q96LM9 149 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 KCNIP2Q9NS61 270 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 TNFSF18Q9UNG2 199 aa10.13□□□□□ -0.79
HERPUD1-210ENST00000565966 TRAV8-2A0A0B4J237 113 aa10.12□□□□□ -0.79
HERPUD1-210ENST00000565966 RNF222A6NCQ9 220 aa10.12□□□□□ -0.79
HERPUD1-210ENST00000565966 TMEM41BQ5BJD5 291 aa10.12□□□□□ -0.79
HERPUD1-210ENST00000565966 IGFL4Q6B9Z1 124 aa10.12□□□□□ -0.79
HERPUD1-210ENST00000565966 CSMD3Q7Z407 3707 aa10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 H3BMM0 161 aa10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 SNRPCP09234 159 aaKnown RBP10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 IGLC2P0DOY2 106 aa10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 GDF5OSQ5U4N7 250 aa10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 FAM78BQ5VT40 261 aa10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 SPATA31B1PQ5VZV4 182 aa10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 RARRES2Q99969 163 aa10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 SAV1Q9H4B6 383 aaPredicted RBP10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 RFNGQ9Y644 331 aa10.11□□□□□ -0.79
HERPUD1-210ENST00000565966 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms