RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 AGPAT2O15120 278 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 LINC00869P0C866 280 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 C4BPBP20851 252 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 DEFB1P60022 68 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 BAXQ07812 192 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 C1orf194Q5T5A4 169 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 ZNF546Q86UE3 836 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 ASB13Q8WXK3 278 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 LINC00052Q96N35 136 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 MGST2Q99735 147 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 NRN1Q9NPD7 142 aa9.96□□□□□ -0.82
VPS9D1-204ENST00000565023 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 GIPP09681 153 aaPredicted RBP9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 ORM2P19652 201 aa9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 SNRPD3P62318 126 aaKnown RBP9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 OR5C1Q8NGR4 320 aa9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 OR1B1Q8NGR6 318 aa9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 SLC25A22Q9H936 323 aa9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 DOK5Q9P104 306 aa9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 MBD2Q9UBB5 411 aa9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 FBXL17Q9UF56 701 aa9.95□□□□□ -0.82
VPS9D1-204ENST00000565023 UBE2L5PA0A1B0GUS4 154 aa9.94□□□□□ -0.82
VPS9D1-204ENST00000565023 HYPMO75409 117 aa9.94□□□□□ -0.82
VPS9D1-204ENST00000565023 CAMLGP49069 296 aa9.94□□□□□ -0.82
VPS9D1-204ENST00000565023 NANOS2P60321 138 aaKnown RBP9.94□□□□□ -0.82
VPS9D1-204ENST00000565023 RAB31Q13636 194 aa9.94□□□□□ -0.82
VPS9D1-204ENST00000565023 PXDC1Q5TGL8 231 aa9.94□□□□□ -0.82
VPS9D1-204ENST00000565023 OR8I2Q8N0Y5 310 aa9.94□□□□□ -0.82
VPS9D1-204ENST00000565023 CHAC2Q8WUX2 184 aa9.94□□□□□ -0.82
VPS9D1-204ENST00000565023 NUPR2A6NF83 97 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 ZNF98A6NK75 572 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 GIG44P09565 113 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 SPP1P10451 314 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 RPL12P30050 165 aaKnown RBP9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 S100A7P31151 101 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 FXYD7P58549 80 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 RAP2BP61225 183 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 PRR20EP86478 221 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 PRR20CP86479 221 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 PRR20DP86480 221 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 PRR20BP86481 221 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 PRR20AP86496 221 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 MORN3Q6PF18 240 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 CEMP1Q6PRD7 247 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 PATE2Q6UY27 113 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 THAP6Q8TBB0 222 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 PHLDA1Q8WV24 401 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 SLC25A39Q9BZJ4 359 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 ARL6Q9H0F7 186 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 HIGD1AQ9Y241 93 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 HSPB11Q9Y547 144 aa9.93□□□□□ -0.82
VPS9D1-204ENST00000565023 H3BRN7 92 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 MPDU1O75352 247 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 LY6G6CO95867 125 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 OR5G3P0C626 314 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 FGF7P21781 194 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 RPL29P47914 159 aaKnown RBP9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 FGL1Q08830 312 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 CLINT1Q14677 625 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 OPCMLQ14982 345 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 GDF5OSQ5U4N7 250 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 C11orf45Q8TAV5 145 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 SHANK2-AS3Q9BTD1 123 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 SCRT1Q9BWW7 348 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 SLC25A32Q9H2D1 315 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 ALMS1Q8TCU4 4167 aa9.92□□□□□ -0.82
VPS9D1-204ENST00000565023 IGHV4-28A0A0C4DH34 117 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 ID1P41134 155 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 Q5BKY6 102 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 MIC13Q5XKP0 118 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 S100A7AQ86SG5 101 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 OR4B1Q8NGF8 309 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 TMEM37Q8WXS4 190 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 C16orf92Q96LL3 132 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 GPR82Q96P67 336 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 NPCDR1Q9BY65 106 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 ARV1Q9H2C2 271 aa9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 SEPSECSQ9HD40 501 aaKnown RBP9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
VPS9D1-204ENST00000565023 ELOA3CA0A087WX78 387 aaPredicted RBP9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 H3BMM0 161 aa9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 GALR1P47211 349 aa9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 Q6ZRG5 221 aa9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 C17orf77Q96MU5 243 aa9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 UHRF2Q96PU4 802 aa9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 ATP5SQ99766 215 aa9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 RSG1Q9BU20 258 aa9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 WDR61Q9GZS3 305 aaKnown RBP9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 C11orf68Q9H3H3 251 aaKnown RBP9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 SLC39A9Q9NUM3 307 aa9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 PXMP4Q9Y6I8 212 aa9.9□□□□□ -0.82
VPS9D1-204ENST00000565023 IGHV3OR16-12A0A075B7B8 117 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 F6UB75 175 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 SOCS3O14543 225 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 COX7A2P2O60397 106 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 RBMY1A1P0DJD3 496 aaKnown RBP9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 RBMY1CP0DJD4 496 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 HLA-DRB4P13762 266 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 PSMB3P49720 205 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms