RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TEP1Q99973 2627 aaKnown RBP16.85■□□□□ 0.29
LINC01960-201ENST00000563759 FAM74A7A6NL05 159 aa16.85■□□□□ 0.29
LINC01960-201ENST00000563759 NPPCP23582 126 aa16.85■□□□□ 0.29
LINC01960-201ENST00000563759 CDX1P47902 265 aaPredicted RBP16.85■□□□□ 0.29
LINC01960-201ENST00000563759 ATP5G3P48201 142 aa16.85■□□□□ 0.29
LINC01960-201ENST00000563759 OR4F17Q8NGA8 305 aa16.85■□□□□ 0.29
LINC01960-201ENST00000563759 SUN5Q8TC36 379 aa16.85■□□□□ 0.29
LINC01960-201ENST00000563759 ARL2-SNX15V9GYD0 113 aa16.85■□□□□ 0.29
LINC01960-201ENST00000563759 NIPBLQ6KC79 2804 aaeCLIP16.85■□□□□ 0.29
LINC01960-201ENST00000563759 MAST4O15021 2626 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 F8W036 122 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 CD81P60033 236 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 OR8I2Q8N0Y5 310 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 C11orf44Q8N8P7 122 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 BLNKQ8WV28 456 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 C4orf3Q8WVX3 66 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 SRP19P09132 144 aaKnown RBP16.84■□□□□ 0.29
LINC01960-201ENST00000563759 FAM106AQ4KMX7 169 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 CYB561D1Q8N8Q1 229 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 KLHL30-AS1Q8NEE0 82 aa16.84■□□□□ 0.29
LINC01960-201ENST00000563759 IGHV4OR15-8A0A075B7B6 117 aa16.83■□□□□ 0.28
LINC01960-201ENST00000563759 A0A087WW49 117 aa16.83■□□□□ 0.28
LINC01960-201ENST00000563759 ADCYAP1P18509 176 aa16.83■□□□□ 0.28
LINC01960-201ENST00000563759 TXNDC17Q9BRA2 123 aa16.83■□□□□ 0.28
LINC01960-201ENST00000563759 IGHV3-49A0A0A0MS15 119 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 NBEAP1P0C6P0 100 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 RPL7P18124 248 aaKnown RBP16.82■□□□□ 0.28
LINC01960-201ENST00000563759 CRYBB3P26998 211 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 C18orf65Q6ZTR6 163 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 JMJD1CQ15652 2540 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 IGHV3OR16-13A0A075B7E8 117 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 IGHV3-74A0A0B4J1X5 117 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 IGHV3-66A0A0C4DH42 116 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 A0A1W2PRE2 83 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 BUB3O43684 328 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 HIST1H1EP10412 219 aaKnown RBP16.82■□□□□ 0.28
LINC01960-201ENST00000563759 CD28P10747 220 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 DEFB136Q30KP8 78 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 GPHB5Q86YW7 130 aa16.82■□□□□ 0.28
LINC01960-201ENST00000563759 DAZ1Q9NQZ3 744 aaKnown RBP16.82■□□□□ 0.28
LINC01960-201ENST00000563759 H3BTX0 84 aa16.81■□□□□ 0.28
LINC01960-201ENST00000563759 PDE6DO43924 150 aa16.81■□□□□ 0.28
LINC01960-201ENST00000563759 HIST2H2BDQ6DRA6 164 aa16.81■□□□□ 0.28
LINC01960-201ENST00000563759 SEC11CQ9BY50 192 aa16.81■□□□□ 0.28
LINC01960-201ENST00000563759 APOHP02749 345 aaPredicted RBP16.8■□□□□ 0.28
LINC01960-201ENST00000563759 PROK1P58294 105 aa16.8■□□□□ 0.28
LINC01960-201ENST00000563759 SOHLH1Q5JUK2 328 aa16.8■□□□□ 0.28
LINC01960-201ENST00000563759 ZNF586Q9NXT0 402 aa16.8■□□□□ 0.28
LINC01960-201ENST00000563759 GGTLC3B5MD39 225 aa16.8■□□□□ 0.28
LINC01960-201ENST00000563759 H3BQ15 152 aa16.8■□□□□ 0.28
LINC01960-201ENST00000563759 MRPS12O15235 138 aaKnown RBP16.8■□□□□ 0.28
LINC01960-201ENST00000563759 APOC3P02656 99 aa16.8■□□□□ 0.28
LINC01960-201ENST00000563759 IGLC2P0DOY2 106 aa16.8■□□□□ 0.28
LINC01960-201ENST00000563759 HOXD3P31249 432 aaPredicted RBP16.8■□□□□ 0.28
LINC01960-201ENST00000563759 TMEM250H0YL14 139 aa16.79■□□□□ 0.28
LINC01960-201ENST00000563759 RANP62826 216 aaKnown RBP16.79■□□□□ 0.28
LINC01960-201ENST00000563759 C1orf194Q5T5A4 169 aa16.79■□□□□ 0.28
LINC01960-201ENST00000563759 WFDC12Q8WWY7 111 aa16.79■□□□□ 0.28
LINC01960-201ENST00000563759 GPR82Q96P67 336 aa16.79■□□□□ 0.28
LINC01960-201ENST00000563759 UFC1Q9Y3C8 167 aa16.79■□□□□ 0.28
LINC01960-201ENST00000563759 A0A1W2PRX2 142 aa16.78■□□□□ 0.28
LINC01960-201ENST00000563759 F6UZH7 168 aa16.78■□□□□ 0.28
LINC01960-201ENST00000563759 ATF4P18848 351 aaPredicted RBP16.78■□□□□ 0.28
LINC01960-201ENST00000563759 OR11H1Q8NG94 326 aa16.78■□□□□ 0.28
LINC01960-201ENST00000563759 NKX6-2Q9C056 277 aaPredicted RBP16.78■□□□□ 0.28
LINC01960-201ENST00000563759 U3KQE9 123 aa16.78■□□□□ 0.28
LINC01960-201ENST00000563759 LINC01619G3V211 115 aa16.78■□□□□ 0.28
LINC01960-201ENST00000563759 SUMO1P63165 101 aaKnown RBP16.78■□□□□ 0.28
LINC01960-201ENST00000563759 C8orf86Q6ZUL3 223 aa16.78■□□□□ 0.28
LINC01960-201ENST00000563759 DPF1Q92782 380 aa16.78■□□□□ 0.28
LINC01960-201ENST00000563759 CITED2Q99967 270 aaPredicted RBP16.78■□□□□ 0.28
LINC01960-201ENST00000563759 TSSC4Q9Y5U2 329 aaPredicted RBP16.78■□□□□ 0.28
LINC01960-201ENST00000563759 TRBV19A0A075B6N1 114 aa16.77■□□□□ 0.27
LINC01960-201ENST00000563759 NDUFS6O75380 124 aaKnown RBP16.77■□□□□ 0.27
LINC01960-201ENST00000563759 GALR1P47211 349 aa16.77■□□□□ 0.27
LINC01960-201ENST00000563759 SYNJ2BPP57105 145 aa16.77■□□□□ 0.27
LINC01960-201ENST00000563759 TM4SF20Q53R12 229 aa16.77■□□□□ 0.27
LINC01960-201ENST00000563759 RPUSD4Q96CM3 377 aaKnown RBP16.77■□□□□ 0.27
LINC01960-201ENST00000563759 GRAMD2BQ96HH9 432 aa16.77■□□□□ 0.27
LINC01960-201ENST00000563759 CARHSP1Q9Y2V2 147 aaKnown RBP16.77■□□□□ 0.27
LINC01960-201ENST00000563759 SCO2A0A1W2PP80 73 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 A0A1W2PS18 150 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 C10orf91Q5T1B1 145 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 FAM90A2PQ658T7 463 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 Q9H3A6 140 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 WNK1Q9H4A3 2382 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 IGHV7-4-1A0A0J9YVY3 117 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 K7EMT4 169 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 ZNF674Q2M3X9 581 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 REC114Q7Z4M0 266 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 C1QL4Q86Z23 238 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 CCDC28AQ8IWP9 274 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 OR1N2Q8NGR9 330 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 C17orf77Q96MU5 243 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 DUX3Q96PT4 197 aa16.76■□□□□ 0.27
LINC01960-201ENST00000563759 SLURP1P55000 103 aa16.75■□□□□ 0.27
LINC01960-201ENST00000563759 PDE6HQ13956 83 aa16.75■□□□□ 0.27
LINC01960-201ENST00000563759 A0A1B0GUS0 222 aa16.74■□□□□ 0.27
LINC01960-201ENST00000563759 A8MWP6 167 aa16.74■□□□□ 0.27
LINC01960-201ENST00000563759 LGALS9O00182 355 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms