RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 UBE2L5PA0A1B0GUS4 154 aa11.37□□□□□ -0.59
AC009088.3-201ENST00000563605 H3BMM0 161 aa11.37□□□□□ -0.59
AC009088.3-201ENST00000563605 AGPAT2O15120 278 aa11.37□□□□□ -0.59
AC009088.3-201ENST00000563605 FGL1Q08830 312 aa11.37□□□□□ -0.59
AC009088.3-201ENST00000563605 GDF5OSQ5U4N7 250 aa11.37□□□□□ -0.59
AC009088.3-201ENST00000563605 PPP1R1CQ8WVI7 109 aa11.37□□□□□ -0.59
AC009088.3-201ENST00000563605 UHRF2Q96PU4 802 aa11.37□□□□□ -0.59
AC009088.3-201ENST00000563605 SLC25A39Q9BZJ4 359 aaPredicted RBP11.37□□□□□ -0.59
AC009088.3-201ENST00000563605 ARL6Q9H0F7 186 aa11.37□□□□□ -0.59
AC009088.3-201ENST00000563605 LCE6AA0A183 80 aa11.36□□□□□ -0.59
AC009088.3-201ENST00000563605 PSMB3P49720 205 aa11.36□□□□□ -0.59
AC009088.3-201ENST00000563605 FXYD7P58549 80 aa11.36□□□□□ -0.59
AC009088.3-201ENST00000563605 BAXQ07812 192 aa11.36□□□□□ -0.59
AC009088.3-201ENST00000563605 IGFL4Q6B9Z1 124 aa11.36□□□□□ -0.59
AC009088.3-201ENST00000563605 OR4B1Q8NGF8 309 aa11.36□□□□□ -0.59
AC009088.3-201ENST00000563605 OR5AC2Q9NZP5 309 aa11.36□□□□□ -0.59
AC009088.3-201ENST00000563605 XCL2Q9UBD3 114 aa11.36□□□□□ -0.59
AC009088.3-201ENST00000563605 STARD9Q9P2P6 4700 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 F6UB75 175 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 H3BRN7 92 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 ISLRO14498 428 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 SOCS3O14543 225 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 CAMLGP49069 296 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 PLP1P60201 277 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 NUTF2P61970 127 aaKnown RBP11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 ATP6V1FQ16864 119 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 RGS21Q2M5E4 152 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 PXDC1Q5TGL8 231 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 PATE2Q6UY27 113 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 GPR82Q96P67 336 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 MGST2Q99735 147 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 SHANK2-AS3Q9BTD1 123 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 RNF24Q9Y225 148 aa11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 DYNC2H1Q8NCM8 4307 aaKnown RBP11.35□□□□□ -0.59
AC009088.3-201ENST00000563605 COX7A2P2O60397 106 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 HLA-DRB4P13762 266 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 ATF4P18848 351 aaPredicted RBP11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 MEOX2P50222 304 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 NANOS2P60321 138 aaKnown RBP11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 VWC2Q2TAL6 325 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 TMEM41BQ5BJD5 291 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 EBLN2Q6P2I7 272 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 C20orf173Q96LM9 149 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 C17orf77Q96MU5 243 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 MED28Q9H204 178 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 ARV1Q9H2C2 271 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 SAV1Q9H4B6 383 aaPredicted RBP11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 WDR83OSQ9Y284 106 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 HLA-DRB4X5D2U9 266 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 CSMD3Q7Z407 3707 aa11.34□□□□□ -0.59
AC009088.3-201ENST00000563605 MPC2O95563 127 aa11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 SNRPCP09234 159 aaKnown RBP11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 RPL7P18124 248 aaKnown RBP11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 FGF7P21781 194 aa11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 FOXI2Q6ZQN5 318 aa11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 Q6ZRG5 221 aa11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 CSNK1G2-AS1Q8NCQ2 148 aa11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 OR5C1Q8NGR4 320 aa11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 C11orf45Q8TAV5 145 aa11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 RPRMQ9NS64 109 aa11.33□□□□□ -0.6
AC009088.3-201ENST00000563605 IGHV4-28A0A0C4DH34 117 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 H0YIZ8 118 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 JTBO76095 146 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 NHLH2Q02577 135 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 CLINT1Q14677 625 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 FAM78BQ5VT40 261 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 CEMP1Q6PRD7 247 aaPredicted RBP11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 RNF182Q8N6D2 247 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 LRRC20Q8TCA0 184 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 C1QTNF4Q9BXJ3 329 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 MBD2Q9UBB5 411 aa11.32□□□□□ -0.6
AC009088.3-201ENST00000563605 IGHV3OR16-12A0A075B7B8 117 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 ELOA3CA0A087WX78 387 aaPredicted RBP11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 MPDU1O75352 247 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 RBMY1A1P0DJD3 496 aaKnown RBP11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 RBMY1CP0DJD4 496 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 PRB4P10163 310 aaPredicted RBP11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 B2MP61769 119 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 RBMY1FQ15415 496 aaKnown RBP11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 C10orf113Q5VZT2 155 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 MIC13Q5XKP0 118 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 LINC00305Q7Z4B0 112 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 Q8NAQ8 132 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 OR1L4Q8NGR5 311 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 PHLDA1Q8WV24 401 aaPredicted RBP11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 X6R8D5 127 aa11.31□□□□□ -0.6
AC009088.3-201ENST00000563605 TRAV8-2A0A0B4J237 113 aa11.3□□□□□ -0.6
AC009088.3-201ENST00000563605 A0A0J9YX75 114 aa11.3□□□□□ -0.6
AC009088.3-201ENST00000563605 NUPR2A6NF83 97 aa11.3□□□□□ -0.6
AC009088.3-201ENST00000563605 ZNF705DP0CH99 300 aaPredicted RBP11.3□□□□□ -0.6
AC009088.3-201ENST00000563605 ZNF705BP0CI00 300 aaPredicted RBP11.3□□□□□ -0.6
AC009088.3-201ENST00000563605 CXCL3P19876 107 aa11.3□□□□□ -0.6
AC009088.3-201ENST00000563605 HLA-DMBP28068 263 aa11.3□□□□□ -0.6
AC009088.3-201ENST00000563605 OPCMLQ14982 345 aa11.3□□□□□ -0.6
AC009088.3-201ENST00000563605 FCN2Q15485 313 aa11.3□□□□□ -0.6
AC009088.3-201ENST00000563605 THAP6Q8TBB0 222 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms