RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SLC25A22Q9H936 323 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 SEPSECSQ9HD40 501 aaKnown RBP6.28□□□□□ -1.4
UBR1-204ENST00000563239 MBD2Q9UBB5 411 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 FBXL17Q9UF56 701 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 PFDN2Q9UHV9 154 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 HIGD1AQ9Y241 93 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 TRAV8-2A0A0B4J237 113 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 KIR2DL5BA0A0G2JN68 375 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 KIR2DL5BA0A0G2JPC4 375 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 OR5G3P0C626 314 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 FGF7P21781 194 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 RPL29P47914 159 aaKnown RBP6.27□□□□□ -1.41
UBR1-204ENST00000563239 DEFB1P60022 68 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 BAXQ07812 192 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 PSMG4Q5JS54 123 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 PXDC1Q5TGL8 231 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 TRPT1Q86TN4 253 aaKnown RBP6.27□□□□□ -1.41
UBR1-204ENST00000563239 KIR2DL5AQ8N109 375 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 KIR2DL5BQ8NHK3 375 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 PPP1R14BQ96C90 147 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 C20orf173Q96LM9 149 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 WWC2-AS2Q96NR7 200 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 RSG1Q9BU20 258 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 ARV1Q9H2C2 271 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 EDA2RQ9HAV5 297 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 HSPB11Q9Y547 144 aa6.27□□□□□ -1.41
UBR1-204ENST00000563239 CSMD3Q7Z407 3707 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 UBE2CO00762 179 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 RPL12P30050 165 aaKnown RBP6.26□□□□□ -1.41
UBR1-204ENST00000563239 GALR1P47211 349 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 PSMB3P49720 205 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 APOC4P55056 127 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 RAP2BP61225 183 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 CLINT1Q14677 625 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 ACTL10Q5JWF8 245 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 GDF5OSQ5U4N7 250 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 Q6ZWC4 215 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 LINC00305Q7Z4B0 112 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 THAP6Q8TBB0 222 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 GPR82Q96P67 336 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 NPCDR1Q9BY65 106 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 CSTL1Q9H114 145 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 WFDC1Q9HC57 220 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 DNAJC4Q9NNZ3 241 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 SLC39A9Q9NUM3 307 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 PXMP4Q9Y6I8 212 aa6.26□□□□□ -1.41
UBR1-204ENST00000563239 ELOA3CA0A087WX78 387 aaPredicted RBP6.25□□□□□ -1.41
UBR1-204ENST00000563239 A0A087X0K7 114 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 TRAV5A0A0B4J249 113 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 G3V3Q6 166 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 H3BMM0 161 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 ISLRO14498 428 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 MPDU1O75352 247 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 GIPP09681 153 aaPredicted RBP6.25□□□□□ -1.41
UBR1-204ENST00000563239 PET100P0DJ07 73 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 B2MP61769 119 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 SNRPD3P62318 126 aaKnown RBP6.25□□□□□ -1.41
UBR1-204ENST00000563239 RAB31Q13636 194 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 DEFB135Q30KP9 77 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 GCSAMLQ5JQS6 135 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 IGFL4Q6B9Z1 124 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 RNF183Q96D59 192 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 ATP5SQ99766 215 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 WDR61Q9GZS3 305 aaKnown RBP6.25□□□□□ -1.41
UBR1-204ENST00000563239 TP53TG1Q9Y2A0 90 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 RFNGQ9Y644 331 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 STARD9Q9P2P6 4700 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 AGRNO00468 2067 aa6.25□□□□□ -1.41
UBR1-204ENST00000563239 SPRY2O43597 315 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 COX7A2P2O60397 106 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 IGLC2P0DOY2 106 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 HLA-DRB4P13762 266 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 RPL7P18124 248 aaKnown RBP6.24□□□□□ -1.41
UBR1-204ENST00000563239 C4BPBP20851 252 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 S100A7P31151 101 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 ID1P41134 155 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 MEOX2P50222 304 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 C10orf113Q5VZT2 155 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 Q6ZRG5 221 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 STHQ8IWL8 128 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 ASB13Q8WXK3 278 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 LINC00052Q96N35 136 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 SMIM3Q9BZL3 60 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 SAV1Q9H4B6 383 aaPredicted RBP6.24□□□□□ -1.41
UBR1-204ENST00000563239 HLA-DRB4X5D2U9 266 aa6.24□□□□□ -1.41
UBR1-204ENST00000563239 A8MTW9 85 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 F6UB75 175 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 H3BQ15 152 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 CA1P00915 261 aaPredicted RBP6.23□□□□□ -1.41
UBR1-204ENST00000563239 SNRPCP09234 159 aaKnown RBP6.23□□□□□ -1.41
UBR1-204ENST00000563239 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
UBR1-204ENST00000563239 HLA-DMBP28068 263 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 SPATA31B1PQ5VZV4 182 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 FOXI2Q6ZQN5 318 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 RNF182Q8N6D2 247 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 CSNK1G2-AS1Q8NCQ2 148 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 OR1L4Q8NGR5 311 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 GATAD1Q8WUU5 269 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 SAT2Q96F10 170 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms