RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 SHANK2-AS3Q9BTD1 123 aa13.76□□□□□ -0.21
PKD1-223ENST00000561668 SLC25A39Q9BZJ4 359 aaPredicted RBP13.76□□□□□ -0.21
PKD1-223ENST00000561668 HSPB11Q9Y547 144 aa13.76□□□□□ -0.21
PKD1-223ENST00000561668 RPL12P30050 165 aaKnown RBP13.75□□□□□ -0.21
PKD1-223ENST00000561668 RAP2BP61225 183 aa13.75□□□□□ -0.21
PKD1-223ENST00000561668 OR8I2Q8N0Y5 310 aa13.75□□□□□ -0.21
PKD1-223ENST00000561668 OR1B1Q8NGR6 318 aa13.75□□□□□ -0.21
PKD1-223ENST00000561668 GATAD1Q8WUU5 269 aa13.75□□□□□ -0.21
PKD1-223ENST00000561668 HIGD1AQ9Y241 93 aa13.75□□□□□ -0.21
PKD1-223ENST00000561668 ELOA3CA0A087WX78 387 aaPredicted RBP13.74□□□□□ -0.21
PKD1-223ENST00000561668 SOCS3O14543 225 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 CA1P00915 261 aaPredicted RBP13.74□□□□□ -0.21
PKD1-223ENST00000561668 ID1P41134 155 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 FGL1Q08830 312 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 PSMG4Q5JS54 123 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 S100A7AQ86SG5 101 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 THAP6Q8TBB0 222 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 TMEM37Q8WXS4 190 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 RARRES2Q99969 163 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 ARL6Q9H0F7 186 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 ARV1Q9H2C2 271 aa13.74□□□□□ -0.21
PKD1-223ENST00000561668 A0A0J9YWU9 116 aa13.73□□□□□ -0.21
PKD1-223ENST00000561668 UBE2L5PA0A1B0GUS4 154 aa13.73□□□□□ -0.21
PKD1-223ENST00000561668 Q5BKY6 102 aa13.73□□□□□ -0.21
PKD1-223ENST00000561668 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
PKD1-223ENST00000561668 PARD6GQ9BYG4 376 aaPredicted RBP13.73□□□□□ -0.21
PKD1-223ENST00000561668 SLC25A32Q9H2D1 315 aa13.73□□□□□ -0.21
PKD1-223ENST00000561668 RNF24Q9Y225 148 aa13.73□□□□□ -0.21
PKD1-223ENST00000561668 G3V3Q6 166 aa13.72□□□□□ -0.21
PKD1-223ENST00000561668 MRPS12O15235 138 aaKnown RBP13.72□□□□□ -0.21
PKD1-223ENST00000561668 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
PKD1-223ENST00000561668 MIC13Q5XKP0 118 aa13.72□□□□□ -0.21
PKD1-223ENST00000561668 MORN3Q6PF18 240 aaPredicted RBP13.72□□□□□ -0.21
PKD1-223ENST00000561668 AQP10Q96PS8 301 aa13.72□□□□□ -0.21
PKD1-223ENST00000561668 ATP5SQ99766 215 aa13.72□□□□□ -0.21
PKD1-223ENST00000561668 SCRT1Q9BWW7 348 aa13.72□□□□□ -0.21
PKD1-223ENST00000561668 NPCDR1Q9BY65 106 aa13.72□□□□□ -0.21
PKD1-223ENST00000561668 WDR61Q9GZS3 305 aaKnown RBP13.72□□□□□ -0.21
PKD1-223ENST00000561668 DNAJC4Q9NNZ3 241 aa13.72□□□□□ -0.21
PKD1-223ENST00000561668 SLC39A9Q9NUM3 307 aa13.72□□□□□ -0.21
PKD1-223ENST00000561668 KNCNA6PVL3 124 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 OR5G3P0C626 314 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 SPP1P10451 314 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 FGF7P21781 194 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 GALR1P47211 349 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 MEOX2P50222 304 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.21
PKD1-223ENST00000561668 SAMD13Q5VXD3 122 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 Q6ZRG5 221 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 OR11H2Q8NH07 326 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 SLC25A22Q9H936 323 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 DOK5Q9P104 306 aa13.71□□□□□ -0.21
PKD1-223ENST00000561668 RPL7P18124 248 aaKnown RBP13.7□□□□□ -0.22
PKD1-223ENST00000561668 B2MP61769 119 aa13.7□□□□□ -0.22
PKD1-223ENST00000561668 CLINT1Q14677 625 aa13.7□□□□□ -0.22
PKD1-223ENST00000561668 TRPT1Q86TN4 253 aaKnown RBP13.7□□□□□ -0.22
PKD1-223ENST00000561668 LINC00052Q96N35 136 aa13.7□□□□□ -0.22
PKD1-223ENST00000561668 UHRF2Q96PU4 802 aa13.7□□□□□ -0.22
PKD1-223ENST00000561668 PXMP4Q9Y6I8 212 aa13.7□□□□□ -0.22
PKD1-223ENST00000561668 A0A087X0K7 114 aa13.69□□□□□ -0.22
PKD1-223ENST00000561668 PSMB3P49720 205 aa13.69□□□□□ -0.22
PKD1-223ENST00000561668 LINC00305Q7Z4B0 112 aa13.69□□□□□ -0.22
PKD1-223ENST00000561668 OR1L4Q8NGR5 311 aa13.69□□□□□ -0.22
PKD1-223ENST00000561668 PFDN5Q99471 154 aa13.69□□□□□ -0.22
PKD1-223ENST00000561668 WFDC1Q9HC57 220 aa13.69□□□□□ -0.22
PKD1-223ENST00000561668 ISLRO14498 428 aa13.68□□□□□ -0.22
PKD1-223ENST00000561668 COX7A2P2O60397 106 aa13.68□□□□□ -0.22
PKD1-223ENST00000561668 C10orf113Q5VZT2 155 aa13.68□□□□□ -0.22
PKD1-223ENST00000561668 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.68□□□□□ -0.22
PKD1-223ENST00000561668 CXorf65A6NEN9 183 aa13.67□□□□□ -0.22
PKD1-223ENST00000561668 MORN5Q5VZ52 161 aa13.67□□□□□ -0.22
PKD1-223ENST00000561668 OR2T35Q8NGX2 323 aa13.67□□□□□ -0.22
PKD1-223ENST00000561668 RSG1Q9BU20 258 aa13.67□□□□□ -0.22
PKD1-223ENST00000561668 C1QTNF4Q9BXJ3 329 aa13.67□□□□□ -0.22
PKD1-223ENST00000561668 RNF222A6NCQ9 220 aa13.66□□□□□ -0.22
PKD1-223ENST00000561668 ATF4P18848 351 aaPredicted RBP13.66□□□□□ -0.22
PKD1-223ENST00000561668 Q6ZNX1 250 aa13.66□□□□□ -0.22
PKD1-223ENST00000561668 C16orf92Q96LL3 132 aa13.66□□□□□ -0.22
PKD1-223ENST00000561668 CLUHP3Q96NS8 147 aa13.66□□□□□ -0.22
PKD1-223ENST00000561668 KCNIP2Q9NS61 270 aa13.66□□□□□ -0.22
PKD1-223ENST00000561668 TNFSF18Q9UNG2 199 aa13.66□□□□□ -0.22
PKD1-223ENST00000561668 PMS2P11Q13670 270 aa13.65□□□□□ -0.22
PKD1-223ENST00000561668 BPIFA4PQ86YQ2 179 aa13.65□□□□□ -0.22
PKD1-223ENST00000561668 TRAV8-2A0A0B4J237 113 aa13.64□□□□□ -0.23
PKD1-223ENST00000561668 C17orf112F2Z3M2 114 aa13.64□□□□□ -0.23
PKD1-223ENST00000561668 H3BMM0 161 aa13.64□□□□□ -0.23
PKD1-223ENST00000561668 IFNA5P01569 189 aa13.64□□□□□ -0.23
PKD1-223ENST00000561668 CXCL2P19875 107 aa13.64□□□□□ -0.23
PKD1-223ENST00000561668 SPATA31B1PQ5VZV4 182 aa13.64□□□□□ -0.23
PKD1-223ENST00000561668 EBLN2Q6P2I7 272 aa13.64□□□□□ -0.23
PKD1-223ENST00000561668 SMIM3Q9BZL3 60 aa13.64□□□□□ -0.23
PKD1-223ENST00000561668 RPRMQ9NS64 109 aa13.64□□□□□ -0.23
PKD1-223ENST00000561668 KMT2CQ8NEZ4 4911 aaKnown RBP13.64□□□□□ -0.23
PKD1-223ENST00000561668 JTBO76095 146 aa13.63□□□□□ -0.23
PKD1-223ENST00000561668 IGLC2P0DOY2 106 aa13.63□□□□□ -0.23
PKD1-223ENST00000561668 HLA-DRB4P13762 266 aa13.63□□□□□ -0.23
PKD1-223ENST00000561668 FOXI2Q6ZQN5 318 aa13.63□□□□□ -0.23
PKD1-223ENST00000561668 ZNF709Q8N972 641 aa13.63□□□□□ -0.23
PKD1-223ENST00000561668 HRH4Q9H3N8 390 aa13.63□□□□□ -0.23
PKD1-223ENST00000561668 TMEM14CQ9P0S9 112 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms