RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 CLPSP04118 112 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 IGFL4Q6B9Z1 124 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 RNF114Q9Y508 228 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 F2Z2F3 143 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 MLANAQ16655 118 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 C20orf204Q6ZNR8 217 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 TMEM158Q8WZ71 300 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 ZNF48Q96MX3 618 aaPredicted RBP8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 TMEM133Q9H2Q1 129 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 LCTP09848 1927 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 BRCA1P38398 1863 aaKnown RBP8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 RIF1Q5UIP0 2472 aaKnown RBP8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 LYNX1G3V0Z9 82 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 LYNX1P0DP58 116 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 C10orf91Q5T1B1 145 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 NEU4Q8WWR8 484 aaPredicted RBP8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 LY96Q9Y6Y9 160 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 SSBP2P81877 361 aaPredicted RBP8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 AMN1Q8IY45 258 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 TNFRSF6BO95407 300 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 CYYR1Q96J86 154 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 DSCR9P59020 149 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 Q0VG73 95 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 PRSS57Q6UWY2 283 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 ZNF329Q86UD4 541 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 RHOGP84095 191 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 STHQ8IWL8 128 aa8.37□□□□□ -1.07
GTF3C1-202ENST00000561623 IGHV1-18A0A0C4DH31 117 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 E9PLN8 166 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 FHL1Q13642 323 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 C2orf82Q6UX34 121 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 CD177Q8N6Q3 437 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 SPTBN1Q01082 2364 aaKnown RBP8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 IGLV3-12A0A075B6K2 115 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 FAM57AQ8TBR7 257 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 TIMM23O14925 209 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 HIST1H4AP62805 103 aaKnown RBP8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 TMEM42Q69YG0 159 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 ZNF474Q6S9Z5 364 aaPredicted RBP8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 C18orf32Q8TCD1 76 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 TRGV2A0A075B6R0 118 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 IGLC2P0DOY2 106 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 IGLC3P0DOY3 106 aa8.36□□□□□ -1.07
GTF3C1-202ENST00000561623 XIRP1Q702N8 1843 aaKnown RBP8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 ZNF726P1Q15940 193 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 PEMTQ9UBM1 199 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 TSSC4Q9Y5U2 329 aaPredicted RBP8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 POLEQ07864 2286 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 ASPHD1Q5U4P2 390 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 IGHV3-73A0A0B4J1V6 119 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 MRPS18CQ9Y3D5 142 aaKnown RBP8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 COLCA1Q6ZS62 124 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 GGNQ86UU5 652 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 LOC102723996A0A087X1L8 192 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 ESPL1Q14674 2120 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 MYO7BQ6PIF6 2116 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 HS3ST6Q96QI5 342 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 LINC00527Q9UJ94 153 aa8.35□□□□□ -1.07
GTF3C1-202ENST00000561623 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 Q6P435 159 aa8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 CFAP161Q6P656 301 aa8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 MBNL3Q9NUK0 354 aaKnown RBP8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 TRAV40A0A0B4J280 105 aa8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 GGTLC3B5MD39 225 aa8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 C9JAW5 83 aa8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 ARMS2P0C7Q2 107 aa8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 TRAV8-3A0A0A6YYJ7 113 aa8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 Q6ZVH6 145 aa8.34□□□□□ -1.07
GTF3C1-202ENST00000561623 SCN10AQ9Y5Y9 1956 aa8.34□□□□□ -1.08
GTF3C1-202ENST00000561623 SIGLEC15Q6ZMC9 328 aa8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 IGHV1-46P01743 117 aa8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 CRPP02741 224 aa8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 ZNF883P0CG24 379 aa8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 GATD1Q8NB37 220 aa8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 CLPSL1A2RUU4 121 aa8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 IGLL1P15814 213 aa8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 CFHR2P36980 270 aa8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 ZNF114Q8NC26 417 aa8.33□□□□□ -1.08
GTF3C1-202ENST00000561623 IGKV1-6A0A0C4DH72 117 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 C9orf118A6NHY6 69 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 TRGV9Q99603 122 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 LIME1Q9H400 295 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 TMEM213A2RRL7 107 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 TOMM40O96008 361 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 LINC00158P58513 81 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 SLAQ13239 276 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 Q86TA4 180 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 TMEM167AQ8TBQ9 72 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 PAX9P55771 341 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 RPL32P62910 135 aaKnown RBP8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 TMEM200BQ69YZ2 307 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 C14orf178Q8N769 122 aaPredicted RBP8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 SLC25A20O43772 301 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 MALP21145 153 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 Q0VFX4 171 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 CSTL1Q9H114 145 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 RPL35AP18077 110 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 224.2 ms