RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 FGF7P21781 194 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 NUP62P37198 522 aaPredicted RBP10.17□□□□□ -0.78
TPM1-230ENST00000561266 APOC4P55056 127 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 BAXQ07812 192 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 CLINT1Q14677 625 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 OPCMLQ14982 345 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 ZNF546Q86UE3 836 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 STX12Q86Y82 276 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 THAP6Q8TBB0 222 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 RNF183Q96D59 192 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 CSTL1Q9H114 145 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 WFDC1Q9HC57 220 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 FBXL17Q9UF56 701 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 RFNGQ9Y644 331 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 F6UB75 175 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 SPRY2O43597 315 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 LYL1P12980 280 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 HLA-DMBP28068 263 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 RAP2BP61225 183 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 RGS21Q2M5E4 152 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 GCSAMLQ5JQS6 135 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 Q6ZWC4 215 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 LINC00052Q96N35 136 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 MED28Q9H204 178 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 PFDN2Q9UHV9 154 aa10.16□□□□□ -0.78
TPM1-230ENST00000561266 H3BMM0 161 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 UBE2CO00762 179 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 HBG1P69891 147 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 HBG2P69892 147 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 ATP6V1FQ16864 119 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 LINC00305Q7Z4B0 112 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 STHQ8IWL8 128 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 RNF182Q8N6D2 247 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 CHAC2Q8WUX2 184 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 SMIM3Q9BZL3 60 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 SLC25A31Q9H0C2 315 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 SEPSECSQ9HD40 501 aaKnown RBP10.15□□□□□ -0.78
TPM1-230ENST00000561266 SLC39A9Q9NUM3 307 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 HSPB11Q9Y547 144 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 PXMP4Q9Y6I8 212 aa10.15□□□□□ -0.78
TPM1-230ENST00000561266 H3BTX0 84 aa10.14□□□□□ -0.79
TPM1-230ENST00000561266 CA1P00915 261 aaPredicted RBP10.14□□□□□ -0.79
TPM1-230ENST00000561266 RPL12P30050 165 aaKnown RBP10.14□□□□□ -0.79
TPM1-230ENST00000561266 GALR1P47211 349 aa10.14□□□□□ -0.79
TPM1-230ENST00000561266 RPL29P47914 159 aaKnown RBP10.14□□□□□ -0.79
TPM1-230ENST00000561266 B2MP61769 119 aa10.14□□□□□ -0.79
TPM1-230ENST00000561266 SNRPD3P62318 126 aaKnown RBP10.14□□□□□ -0.79
TPM1-230ENST00000561266 MUC7Q8TAX7 377 aa10.14□□□□□ -0.79
TPM1-230ENST00000561266 NPCDR1Q9BY65 106 aa10.14□□□□□ -0.79
TPM1-230ENST00000561266 DNAJC4Q9NNZ3 241 aa10.14□□□□□ -0.79
TPM1-230ENST00000561266 STARD9Q9P2P6 4700 aa10.14□□□□□ -0.79
TPM1-230ENST00000561266 G3V3Q6 166 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 ISLRO14498 428 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 COX7A2P2O60397 106 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 HLA-DRB4P13762 266 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 PSMB3P49720 205 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 FGL1Q08830 312 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 PXDC1Q5TGL8 231 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 C10orf113Q5VZT2 155 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 SPATA31B1PQ5VZV4 182 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 C16orf92Q96LL3 132 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 WDR61Q9GZS3 305 aaKnown RBP10.13□□□□□ -0.79
TPM1-230ENST00000561266 SAV1Q9H4B6 383 aaPredicted RBP10.13□□□□□ -0.79
TPM1-230ENST00000561266 CLEC5AQ9NY25 188 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 TP53TG1Q9Y2A0 90 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 HLA-DRB4X5D2U9 266 aa10.13□□□□□ -0.79
TPM1-230ENST00000561266 A0A087X0K7 114 aa10.12□□□□□ -0.79
TPM1-230ENST00000561266 H3BQ15 152 aa10.12□□□□□ -0.79
TPM1-230ENST00000561266 SLC17A3O00476 420 aa10.12□□□□□ -0.79
TPM1-230ENST00000561266 IGKV3-20P01619 116 aa10.12□□□□□ -0.79
TPM1-230ENST00000561266 ZNF705DP0CH99 300 aaPredicted RBP10.12□□□□□ -0.79
TPM1-230ENST00000561266 ZNF705BP0CI00 300 aaPredicted RBP10.12□□□□□ -0.79
TPM1-230ENST00000561266 RPL7P18124 248 aaKnown RBP10.12□□□□□ -0.79
TPM1-230ENST00000561266 FXYD7P58549 80 aa10.12□□□□□ -0.79
TPM1-230ENST00000561266 ZFAND6Q6FIF0 208 aa10.12□□□□□ -0.79
TPM1-230ENST00000561266 CSNK1G2-AS1Q8NCQ2 148 aa10.12□□□□□ -0.79
TPM1-230ENST00000561266 GPR82Q96P67 336 aa10.12□□□□□ -0.79
TPM1-230ENST00000561266 ELOA3CA0A087WX78 387 aaPredicted RBP10.11□□□□□ -0.79
TPM1-230ENST00000561266 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
TPM1-230ENST00000561266 ATF4P18848 351 aaPredicted RBP10.11□□□□□ -0.79
TPM1-230ENST00000561266 ID1P41134 155 aa10.11□□□□□ -0.79
TPM1-230ENST00000561266 RAB31Q13636 194 aa10.11□□□□□ -0.79
TPM1-230ENST00000561266 Q6ZRG5 221 aa10.11□□□□□ -0.79
TPM1-230ENST00000561266 ATP5SQ99766 215 aa10.11□□□□□ -0.79
TPM1-230ENST00000561266 A0A0J9YX75 114 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 MPDU1O75352 247 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 PET100P0DJ07 73 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 IGLC2P0DOY2 106 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 MEOX2P50222 304 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 CASC10Q5T4H9 136 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 FAM78BQ5VT40 261 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 ZNF709Q8N972 641 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 OR11H2Q8NH07 326 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 SLC35B3Q9H1N7 401 aa10.1□□□□□ -0.79
TPM1-230ENST00000561266 A8MTW9 85 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 ZNF705FA8MVS1 300 aaPredicted RBP10.09□□□□□ -0.79
TPM1-230ENST00000561266 DEFB4AO15263 64 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 EIF3GO75821 320 aaKnown RBP eCLIP10.09□□□□□ -0.79
TPM1-230ENST00000561266 GIPP09681 153 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms