RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 FAT3Q8TDW7 4589 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 IGLV5-52A0A0A0MRZ9 124 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 MARCH11A6NNE9 402 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 I3L2K1 104 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 SSNA1O43805 119 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 SFT2D2O95562 160 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 IGLV2-14P01704 120 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 HNRNPCP07910 306 aaKnown RBP eCLIP6.58□□□□□ -1.36
HERC1-210ENST00000560897 G6PCP35575 357 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 BRWD1-AS2P59051 145 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 POU2AF1Q16633 256 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 ZBTB8BQ8NAP8 495 aaPredicted RBP6.58□□□□□ -1.36
HERC1-210ENST00000560897 OR4B1Q8NGF8 309 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 GNPNAT1Q96EK6 184 aaPredicted RBP6.58□□□□□ -1.36
HERC1-210ENST00000560897 TMEM222Q9H0R3 208 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 NDUFA4L2Q9NRX3 87 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 MRPS16Q9Y3D3 137 aaKnown RBP6.58□□□□□ -1.36
HERC1-210ENST00000560897 OR51B2Q9Y5P1 312 aa6.58□□□□□ -1.36
HERC1-210ENST00000560897 C9orf170A2RU37 121 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 FAM25EA8MYX2 175 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 FAM90A26D6RGX4 464 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 P0C879 139 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 CRYBB3P26998 211 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 BCAP31P51572 246 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 LRP2P98164 4655 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 IFITM3Q01628 133 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 PPP1R1AQ13522 171 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 EIF4EBP1Q13541 118 aaPredicted RBP6.57□□□□□ -1.36
HERC1-210ENST00000560897 FAM219AQ8IW50 185 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 RBPMSQ93062 196 aaKnown RBP6.57□□□□□ -1.36
HERC1-210ENST00000560897 IL22RA2Q969J5 263 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 TMEM230Q96A57 120 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 MRGPRFQ96AM1 343 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 TP53RKQ96S44 253 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 SEPSECSQ9HD40 501 aaKnown RBP6.57□□□□□ -1.36
HERC1-210ENST00000560897 PRNDQ9UKY0 176 aa6.57□□□□□ -1.36
HERC1-210ENST00000560897 A0A0B4J2A0 478 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 A0A1B0GU03 582 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 DUXBA0A1W2PPF3 345 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 C5orf51A6NDU8 294 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 WRBO00258 174 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 CDS2O95674 445 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 HOXB5P09067 269 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 UCP1P25874 307 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 NKX2-1P43699 371 aaPredicted RBP6.56□□□□□ -1.36
HERC1-210ENST00000560897 OR5I1Q13606 314 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 C12orf45Q8N5I9 185 aaPredicted RBP6.56□□□□□ -1.36
HERC1-210ENST00000560897 OR1S1Q8NH92 325 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 ZNF431Q8TF32 576 aaPredicted RBP6.56□□□□□ -1.36
HERC1-210ENST00000560897 GLYATL2Q8WU03 294 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 RNF125Q96EQ8 232 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 NRN1Q9NPD7 142 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.56□□□□□ -1.36
HERC1-210ENST00000560897 SHPKQ9UHJ6 478 aa6.56□□□□□ -1.36
HERC1-210ENST00000560897 CBY3A6NI87 242 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 IL5P05113 134 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 SULT1A3P0DMM9 295 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 SULT1A4P0DMN0 295 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 BTCP35070 178 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 ERHP84090 104 aaKnown RBP6.55□□□□□ -1.36
HERC1-210ENST00000560897 PSG9Q00887 426 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 ESRGQ1W209 222 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 FOXI2Q6ZQN5 318 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 SELENOHQ8IZQ5 122 aaKnown RBP6.55□□□□□ -1.36
HERC1-210ENST00000560897 CADM3Q8N126 398 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 C1orf158Q8N1D5 194 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 SLC35G3Q8N808 338 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 ZNF709Q8N972 641 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 MARVELD1Q9BSK0 173 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 GSKIPQ9P0R6 139 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 PAIP2BQ9ULR5 123 aaKnown RBP6.55□□□□□ -1.36
HERC1-210ENST00000560897 TMEM56-RWDD3S4R434 201 aa6.55□□□□□ -1.36
HERC1-210ENST00000560897 TRAV26-1A0A087WT03 109 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 CEBPZOSA8MTT3 80 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 SNRPGP15A8MWD9 76 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 SIVA1O15304 175 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 MED6O75586 246 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 PRB4P10163 310 aaPredicted RBP6.54□□□□□ -1.36
HERC1-210ENST00000560897 SNCAP37840 140 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 SUB1P53999 127 aaKnown RBP eCLIP6.54□□□□□ -1.36
HERC1-210ENST00000560897 RPP30P78346 268 aaKnown RBP6.54□□□□□ -1.36
HERC1-210ENST00000560897 ID3Q02535 119 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 GDF5OSQ5U4N7 250 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 LYZL2Q7Z4W2 148 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 RXFP4Q8TDU9 374 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 GLMPQ8WWB7 406 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 SEC22AQ96IW7 307 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 LINC00052Q96N35 136 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 SEC22CQ9BRL7 303 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 SLC35B3Q9H1N7 401 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 MED28Q9H204 178 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 SAV1Q9H4B6 383 aaPredicted RBP6.54□□□□□ -1.36
HERC1-210ENST00000560897 PRR13Q9NZ81 148 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 NSG2Q9Y328 171 aa6.54□□□□□ -1.36
HERC1-210ENST00000560897 A0A0J9YY99 117 aa6.53□□□□□ -1.36
HERC1-210ENST00000560897 TMEM50AO95807 157 aa6.53□□□□□ -1.36
HERC1-210ENST00000560897 RLN2P04090 185 aa6.53□□□□□ -1.36
HERC1-210ENST00000560897 PVALBP20472 110 aaPredicted RBP6.53□□□□□ -1.36
HERC1-210ENST00000560897 M6PRP20645 277 aa6.53□□□□□ -1.36
HERC1-210ENST00000560897 ID1P41134 155 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms