RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 SLC25A31Q9H0C2 315 aa8.86□□□□□ -0.99
USP8-212ENST00000560730 ARV1Q9H2C2 271 aa8.86□□□□□ -0.99
USP8-212ENST00000560730 SEPSECSQ9HD40 501 aaKnown RBP8.86□□□□□ -0.99
USP8-212ENST00000560730 GALR1P47211 349 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 PRR20EP86478 221 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 PRR20CP86479 221 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 PRR20DP86480 221 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 PRR20BP86481 221 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 PRR20AP86496 221 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 BAXQ07812 192 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 ATP6V1FQ16864 119 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 GDF5OSQ5U4N7 250 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 OR11H7Q8NGC8 314 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 OR5C1Q8NGR4 320 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 TMEM37Q8WXS4 190 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 C20orf173Q96LM9 149 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 LINC00052Q96N35 136 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 MBD2Q9UBB5 411 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 TP53TG1Q9Y2A0 90 aa8.85□□□□□ -0.99
USP8-212ENST00000560730 H3BMM0 161 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 CA1P00915 261 aaPredicted RBP8.84□□□□□ -0.99
USP8-212ENST00000560730 FGF7P21781 194 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 ID1P41134 155 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 PSMB3P49720 205 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 RAB31Q13636 194 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 CLINT1Q14677 625 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 OPCMLQ14982 345 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 PXDC1Q5TGL8 231 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 IGFL4Q6B9Z1 124 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 LINC00305Q7Z4B0 112 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 THAP6Q8TBB0 222 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 GPR82Q96P67 336 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 MED28Q9H204 178 aa8.84□□□□□ -0.99
USP8-212ENST00000560730 F6UB75 175 aa8.83□□□□□ -1
USP8-212ENST00000560730 ISLRO14498 428 aa8.83□□□□□ -1
USP8-212ENST00000560730 MRPS12O15235 138 aaKnown RBP8.83□□□□□ -1
USP8-212ENST00000560730 COX7A2P2O60397 106 aa8.83□□□□□ -1
USP8-212ENST00000560730 C4BPBP20851 252 aa8.83□□□□□ -1
USP8-212ENST00000560730 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
USP8-212ENST00000560730 RGS21Q2M5E4 152 aa8.83□□□□□ -1
USP8-212ENST00000560730 C10orf113Q5VZT2 155 aa8.83□□□□□ -1
USP8-212ENST00000560730 CHAC2Q8WUX2 184 aa8.83□□□□□ -1
USP8-212ENST00000560730 C16orf92Q96LL3 132 aa8.83□□□□□ -1
USP8-212ENST00000560730 DNAJC4Q9NNZ3 241 aa8.83□□□□□ -1
USP8-212ENST00000560730 SLC39A9Q9NUM3 307 aa8.83□□□□□ -1
USP8-212ENST00000560730 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
USP8-212ENST00000560730 TRAV5A0A0B4J249 113 aa8.82□□□□□ -1
USP8-212ENST00000560730 C3orf84H3BNL1 204 aa8.82□□□□□ -1
USP8-212ENST00000560730 SNRPCP09234 159 aaKnown RBP8.82□□□□□ -1
USP8-212ENST00000560730 HLA-DRB4P13762 266 aa8.82□□□□□ -1
USP8-212ENST00000560730 RPL7P18124 248 aaKnown RBP8.82□□□□□ -1
USP8-212ENST00000560730 ATF4P18848 351 aaPredicted RBP8.82□□□□□ -1
USP8-212ENST00000560730 RPL12P30050 165 aaKnown RBP8.82□□□□□ -1
USP8-212ENST00000560730 S100A7P31151 101 aa8.82□□□□□ -1
USP8-212ENST00000560730 MEOX2P50222 304 aa8.82□□□□□ -1
USP8-212ENST00000560730 B2MP61769 119 aa8.82□□□□□ -1
USP8-212ENST00000560730 FGL1Q08830 312 aa8.82□□□□□ -1
USP8-212ENST00000560730 Q5BKY6 102 aa8.82□□□□□ -1
USP8-212ENST00000560730 ZFAND6Q6FIF0 208 aa8.82□□□□□ -1
USP8-212ENST00000560730 RNF182Q8N6D2 247 aa8.82□□□□□ -1
USP8-212ENST00000560730 NPCDR1Q9BY65 106 aa8.82□□□□□ -1
USP8-212ENST00000560730 HSPB11Q9Y547 144 aa8.82□□□□□ -1
USP8-212ENST00000560730 PXMP4Q9Y6I8 212 aa8.82□□□□□ -1
USP8-212ENST00000560730 HLA-DRB4X5D2U9 266 aa8.82□□□□□ -1
USP8-212ENST00000560730 ELOA3CA0A087WX78 387 aaPredicted RBP8.81□□□□□ -1
USP8-212ENST00000560730 A0A0J9YWU9 116 aa8.81□□□□□ -1
USP8-212ENST00000560730 IGKV3-20P01619 116 aa8.81□□□□□ -1
USP8-212ENST00000560730 PET100P0DJ07 73 aa8.81□□□□□ -1
USP8-212ENST00000560730 PRB4P10163 310 aaPredicted RBP8.81□□□□□ -1
USP8-212ENST00000560730 SPP1P10451 314 aa8.81□□□□□ -1
USP8-212ENST00000560730 LYL1P12980 280 aa8.81□□□□□ -1
USP8-212ENST00000560730 HLA-DMBP28068 263 aa8.81□□□□□ -1
USP8-212ENST00000560730 OXA1LQ15070 435 aa8.81□□□□□ -1
USP8-212ENST00000560730 GCSAMLQ5JQS6 135 aa8.81□□□□□ -1
USP8-212ENST00000560730 CASC10Q5T4H9 136 aa8.81□□□□□ -1
USP8-212ENST00000560730 Q6ZRG5 221 aa8.81□□□□□ -1
USP8-212ENST00000560730 SMIM3Q9BZL3 60 aa8.81□□□□□ -1
USP8-212ENST00000560730 SAV1Q9H4B6 383 aaPredicted RBP8.81□□□□□ -1
USP8-212ENST00000560730 WFDC1Q9HC57 220 aa8.81□□□□□ -1
USP8-212ENST00000560730 CLEC5AQ9NY25 188 aa8.81□□□□□ -1
USP8-212ENST00000560730 A0A087X0K7 114 aa8.8□□□□□ -1
USP8-212ENST00000560730 MPDU1O75352 247 aa8.8□□□□□ -1
USP8-212ENST00000560730 MORN3Q6PF18 240 aaPredicted RBP8.8□□□□□ -1
USP8-212ENST00000560730 FOXI2Q6ZQN5 318 aa8.8□□□□□ -1
USP8-212ENST00000560730 S100A7AQ86SG5 101 aa8.8□□□□□ -1
USP8-212ENST00000560730 OR11H2Q8NH07 326 aa8.8□□□□□ -1
USP8-212ENST00000560730 GATAD1Q8WUU5 269 aa8.8□□□□□ -1
USP8-212ENST00000560730 RARRES2Q99969 163 aa8.8□□□□□ -1
USP8-212ENST00000560730 WDR61Q9GZS3 305 aaKnown RBP8.8□□□□□ -1
USP8-212ENST00000560730 A0A0J9YX75 114 aa8.8□□□□□ -1
USP8-212ENST00000560730 H3BTX0 84 aa8.8□□□□□ -1
USP8-212ENST00000560730 FXYD7P58549 80 aa8.8□□□□□ -1
USP8-212ENST00000560730 FAM78BQ5VT40 261 aa8.8□□□□□ -1
USP8-212ENST00000560730 SAMD13Q5VXD3 122 aa8.8□□□□□ -1
USP8-212ENST00000560730 CSNK1G2-AS1Q8NCQ2 148 aa8.8□□□□□ -1
USP8-212ENST00000560730 OR4B1Q8NGF8 309 aa8.8□□□□□ -1
USP8-212ENST00000560730 OR1L4Q8NGR5 311 aa8.8□□□□□ -1
USP8-212ENST00000560730 ATP5SQ99766 215 aa8.8□□□□□ -1
USP8-212ENST00000560730 RPRMQ9NS64 109 aa8.8□□□□□ -1
USP8-212ENST00000560730 XCL2Q9UBD3 114 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms