RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 LINC00854A0A1B0GVQ3 168 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 ZNF701M0R085 212 aaPredicted RBP9.03□□□□□ -0.96
SNX1-209ENST00000559961 SSSCA1O60232 199 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 NDUFB6O95139 128 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 SCGB1D2O95969 90 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 ANXA7P20073 488 aaKnown RBP9.03□□□□□ -0.96
SNX1-209ENST00000559961 DAD1P61803 113 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 POLR2GP62487 172 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNX1-209ENST00000559961 RHOBP62745 196 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 ID3Q02535 119 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 ZNF846Q147U1 533 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 GSG1LQ6UXU4 331 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 ZNF738Q8NE65 137 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 NPVFQ9HCQ7 196 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 GSKIPQ9P0R6 139 aa9.03□□□□□ -0.96
SNX1-209ENST00000559961 IGKV1OR2-108A0A075B7D4 117 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 F6UB75 175 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 L7N2F9 121 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 SOCS3O14543 225 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 GOSR2O14653 212 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 ADAP1O75689 374 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 INSP01308 110 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 OR4E1P0C645 316 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 GATA2P23769 480 aaPredicted RBP9.02□□□□□ -0.97
SNX1-209ENST00000559961 DEFB1P60022 68 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 VAMP2P63027 116 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 RAB31Q13636 194 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 OXA1LQ15070 435 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 SOHLH1Q5JUK2 328 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 FAM222AQ5U5X8 452 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 SMIM8Q96KF7 97 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 IGF2BP2-AS1Q96M15 143 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 SLC25A39Q9BZJ4 359 aaPredicted RBP9.02□□□□□ -0.97
SNX1-209ENST00000559961 DKK2Q9UBU2 259 aa9.02□□□□□ -0.97
SNX1-209ENST00000559961 LINC00869P0C866 280 aa9.01□□□□□ -0.97
SNX1-209ENST00000559961 RRAS2P62070 204 aaPredicted RBP9.01□□□□□ -0.97
SNX1-209ENST00000559961 DLK1P80370 383 aa9.01□□□□□ -0.97
SNX1-209ENST00000559961 IAH1Q2TAA2 248 aaPredicted RBP9.01□□□□□ -0.97
SNX1-209ENST00000559961 PXDC1Q5TGL8 231 aa9.01□□□□□ -0.97
SNX1-209ENST00000559961 TEPPQ6URK8 271 aa9.01□□□□□ -0.97
SNX1-209ENST00000559961 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.01□□□□□ -0.97
SNX1-209ENST00000559961 ZNF709Q8N972 641 aa9.01□□□□□ -0.97
SNX1-209ENST00000559961 SHANK2-AS3Q9BTD1 123 aa9.01□□□□□ -0.97
SNX1-209ENST00000559961 SRRQ9GZT4 340 aa9.01□□□□□ -0.97
SNX1-209ENST00000559961 YTHDF2Q9Y5A9 579 aaKnown RBP9.01□□□□□ -0.97
SNX1-209ENST00000559961 FNDC10F2Z333 226 aa9□□□□□ -0.97
SNX1-209ENST00000559961 CNN1P51911 297 aaKnown RBP9□□□□□ -0.97
SNX1-209ENST00000559961 TAS2R30P59541 319 aa9□□□□□ -0.97
SNX1-209ENST00000559961 LINC01587Q99440 93 aa9□□□□□ -0.97
SNX1-209ENST00000559961 SCRT1Q9BWW7 348 aa9□□□□□ -0.97
SNX1-209ENST00000559961 ARL6Q9H0F7 186 aa9□□□□□ -0.97
SNX1-209ENST00000559961 PRSS46E5RG02 174 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 H3BRN7 92 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 M0R2N4 97 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 TSC22D2O75157 780 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 METTL15P1P0C7V9 234 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 BCAP31P51572 246 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 HIST1H1AQ02539 215 aaPredicted RBP8.99□□□□□ -0.97
SNX1-209ENST00000559961 ZNF546Q86UE3 836 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 TMEM256Q8N2U0 113 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 C20orf173Q96LM9 149 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 ATG101Q9BSB4 218 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 GGACTQ9BVM4 153 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 FLVCR2Q9UPI3 526 aa8.99□□□□□ -0.97
SNX1-209ENST00000559961 AGRNO00468 2067 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 LYRM9A8MSI8 78 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 FAM25EA8MYX2 175 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 COX7A2P2O60397 106 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 PVALBP20472 110 aaPredicted RBP8.98□□□□□ -0.97
SNX1-209ENST00000559961 PLP1P60201 277 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 BAK1Q16611 211 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 SPINK13Q1W4C9 94 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 RNF212Q495C1 297 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 IGFL4Q6B9Z1 124 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 TMEM182Q6ZP80 229 aaPredicted RBP8.98□□□□□ -0.97
SNX1-209ENST00000559961 Q6ZRG5 221 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 C1orf158Q8N1D5 194 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 RNF182Q8N6D2 247 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 C15orf53Q8NAA6 179 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 OR11H7Q8NGC8 314 aa8.98□□□□□ -0.97
SNX1-209ENST00000559961 C5orf51A6NDU8 294 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 BOLA2-SMG1P6H3BVE0 249 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 M0R2Z0 102 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 HTN1P15515 57 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 CXCL2P19875 107 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 TSPOP30536 169 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 PSG3Q16557 428 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 LCN15Q6UWW0 184 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 BPIFA4PQ86YQ2 179 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 ZBTB8BQ8NAP8 495 aaPredicted RBP8.97□□□□□ -0.97
SNX1-209ENST00000559961 OR10J6PQ8NGY7 276 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 ARV1Q9H2C2 271 aa8.97□□□□□ -0.97
SNX1-209ENST00000559961 A0A087X0K7 114 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 ZNF705GA8MUZ8 300 aaPredicted RBP8.96□□□□□ -0.98
SNX1-209ENST00000559961 DEFB130BP0DP73 79 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 DEFB130AP0DP74 79 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 LGALS9BQ3B8N2 356 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 TMEM14EPQ6UXP3 125 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 LINC00305Q7Z4B0 112 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 CCDC28AQ8IWP9 274 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms