RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 C1QL4Q86Z23 238 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 FXYD5Q96DB9 178 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 RAX2Q96IS3 184 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 TMEM167BQ9NRX6 74 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 UFC1Q9Y3C8 167 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 A8MWP6 167 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 OR10J4P0C629 311 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 PPT1P50897 306 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 SLURP1P55000 103 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 SYNJ2BPP57105 145 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 FHL3Q13643 280 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 TM4SF20Q53R12 229 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 C1orf194Q5T5A4 169 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 BPIFA4PQ86YQ2 179 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 EIF4E3Q8N5X7 224 aaKnown RBP9.3□□□□□ -0.92
HERC1-205ENST00000559886 DUX3Q96PT4 197 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 WNK1Q9H4A3 2382 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 MRPS12O15235 138 aaKnown RBP9.29□□□□□ -0.92
HERC1-205ENST00000559886 UBE2L3P68036 154 aaKnown RBP9.29□□□□□ -0.92
HERC1-205ENST00000559886 GUK1Q16774 197 aa9.29□□□□□ -0.92
HERC1-205ENST00000559886 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
HERC1-205ENST00000559886 MANBALQ9NQG1 85 aa9.29□□□□□ -0.92
HERC1-205ENST00000559886 IGHV3-49A0A0A0MS15 119 aa9.29□□□□□ -0.92
HERC1-205ENST00000559886 RBFOX3A6NFN3 312 aa9.29□□□□□ -0.92
HERC1-205ENST00000559886 CCL24O00175 119 aa9.29□□□□□ -0.92
HERC1-205ENST00000559886 IFNA1P01562 189 aa9.29□□□□□ -0.92
HERC1-205ENST00000559886 RPL7P18124 248 aaKnown RBP9.29□□□□□ -0.92
HERC1-205ENST00000559886 HAGHQ16775 308 aa9.29□□□□□ -0.92
HERC1-205ENST00000559886 OR8I2Q8N0Y5 310 aa9.29□□□□□ -0.92
HERC1-205ENST00000559886 NARS2Q96I59 477 aaKnown RBP9.29□□□□□ -0.92
HERC1-205ENST00000559886 IGHV3OR16-13A0A075B7E8 117 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 IGHV3-74A0A0B4J1X5 117 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 IGHV7-4-1A0A0J9YVY3 117 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 TMEM213A2RRL7 107 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 BCL2P10415 239 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 RARRES2Q99969 163 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 EIF5A2Q9GZV4 153 aaKnown RBP9.28□□□□□ -0.92
HERC1-205ENST00000559886 TENM1Q9UKZ4 2725 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 IGHV3-66A0A0C4DH42 116 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 A0A1W2PS18 150 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 CD5P06127 495 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 NBEAP1P0C6P0 100 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 IGLC2P0DOY2 106 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 HIST1H1EP10412 219 aaKnown RBP9.28□□□□□ -0.92
HERC1-205ENST00000559886 TAGLN2P37802 199 aaKnown RBP9.28□□□□□ -0.92
HERC1-205ENST00000559886 SRSF3P84103 164 aaKnown RBP9.28□□□□□ -0.92
HERC1-205ENST00000559886 ZNF506Q5JVG8 444 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 C16orf54Q6UWD8 224 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 GPR82Q96P67 336 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
HERC1-205ENST00000559886 H3BQ15 152 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 PAGE4O60829 102 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 NSUN5P1Q3KNT7 163 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 UQCC3Q6UW78 93 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 OR4F17Q8NGA8 305 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 DLX4Q92988 240 aaPredicted RBP9.27□□□□□ -0.93
HERC1-205ENST00000559886 OR4F4Q96R69 305 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 CITED1Q99966 193 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 ZNF586Q9NXT0 402 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 VAX2Q9UIW0 290 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 ARL2-SNX15V9GYD0 113 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 UBE2G2P60604 165 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 ICAM4Q14773 271 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 GLMPQ8WWB7 406 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 GRAMD2BQ96HH9 432 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 CITED4Q96RK1 184 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 RHPN1-AS1Q9BWJ2 59 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 YTHDF2Q9Y5A9 579 aaKnown RBP9.27□□□□□ -0.93
HERC1-205ENST00000559886 SMAD5-AS1Q9Y6J3 95 aa9.27□□□□□ -0.93
HERC1-205ENST00000559886 FAM74A7A6NL05 159 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 CHEK1O14757 476 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 SNRPCP09234 159 aaKnown RBP9.26□□□□□ -0.93
HERC1-205ENST00000559886 EDN2P20800 178 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 PEA15Q15121 130 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 SMDT1Q9H4I9 107 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 TMEM231Q9H6L2 316 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 A0A1W2PRE2 83 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 C2orf70A6NJV1 201 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 GALR1P47211 349 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 MEF2BQ02080 365 aaPredicted RBP9.26□□□□□ -0.93
HERC1-205ENST00000559886 OR9G4Q8NGQ1 327 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 BLNKQ8WV28 456 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 PEMTQ9UBM1 199 aa9.26□□□□□ -0.93
HERC1-205ENST00000559886 FBN1P35555 2871 aaKnown RBP9.26□□□□□ -0.93
HERC1-205ENST00000559886 TRBV19A0A075B6N1 114 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 C9JQL5 133 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 CBLN1P23435 193 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 MYCNOSP40205 109 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 CST9LP1Q5W188 147 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 SIGLEC15Q6ZMC9 328 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 RXFP4Q8TDU9 374 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 C17orf77Q96MU5 243 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 TXNDC17Q9BRA2 123 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 A0A087X0K7 114 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 H3BTX0 84 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 BMI1P35226 326 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 CD81P60033 236 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 ELOVL1Q9BW60 279 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms