RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 NPCDR1Q9BY65 106 aa14.36□□□□□ -0.11
SHF-205ENST00000559566 PXMP4Q9Y6I8 212 aa14.36□□□□□ -0.11
SHF-205ENST00000559566 MRPS12O15235 138 aaKnown RBP14.35□□□□□ -0.11
SHF-205ENST00000559566 RAB31Q13636 194 aa14.35□□□□□ -0.11
SHF-205ENST00000559566 GCSAMLQ5JQS6 135 aa14.35□□□□□ -0.11
SHF-205ENST00000559566 C20orf173Q96LM9 149 aa14.35□□□□□ -0.11
SHF-205ENST00000559566 WDR61Q9GZS3 305 aaKnown RBP14.35□□□□□ -0.11
SHF-205ENST00000559566 ZMAT4Q9H898 229 aa14.35□□□□□ -0.11
SHF-205ENST00000559566 SLC39A9Q9NUM3 307 aa14.35□□□□□ -0.11
SHF-205ENST00000559566 TENM3Q9P273 2699 aa14.34□□□□□ -0.11
SHF-205ENST00000559566 COX7A2P2O60397 106 aa14.34□□□□□ -0.11
SHF-205ENST00000559566 B2MP61769 119 aa14.34□□□□□ -0.11
SHF-205ENST00000559566 PXDC1Q5TGL8 231 aa14.34□□□□□ -0.11
SHF-205ENST00000559566 LINC00305Q7Z4B0 112 aa14.34□□□□□ -0.11
SHF-205ENST00000559566 ATP5SQ99766 215 aa14.34□□□□□ -0.11
SHF-205ENST00000559566 RFNGQ9Y644 331 aa14.34□□□□□ -0.11
SHF-205ENST00000559566 TRAV8-2A0A0B4J237 113 aa14.33□□□□□ -0.12
SHF-205ENST00000559566 TRAV5A0A0B4J249 113 aa14.33□□□□□ -0.12
SHF-205ENST00000559566 SNRPCP09234 159 aaKnown RBP14.33□□□□□ -0.12
SHF-205ENST00000559566 GALR1P47211 349 aa14.33□□□□□ -0.12
SHF-205ENST00000559566 C10orf113Q5VZT2 155 aa14.33□□□□□ -0.12
SHF-205ENST00000559566 IGFL4Q6B9Z1 124 aa14.33□□□□□ -0.12
SHF-205ENST00000559566 TRPT1Q86TN4 253 aaKnown RBP14.33□□□□□ -0.12
SHF-205ENST00000559566 MPDU1O75352 247 aa14.32□□□□□ -0.12
SHF-205ENST00000559566 ACTL10Q5JWF8 245 aa14.32□□□□□ -0.12
SHF-205ENST00000559566 GDF5OSQ5U4N7 250 aa14.32□□□□□ -0.12
SHF-205ENST00000559566 LINC00052Q96N35 136 aa14.32□□□□□ -0.12
SHF-205ENST00000559566 SEPSECSQ9HD40 501 aaKnown RBP14.32□□□□□ -0.12
SHF-205ENST00000559566 DNAJC4Q9NNZ3 241 aa14.32□□□□□ -0.12
SHF-205ENST00000559566 KIR2DL5BA0A0G2JN68 375 aa14.31□□□□□ -0.12
SHF-205ENST00000559566 KIR2DL5BA0A0G2JPC4 375 aa14.31□□□□□ -0.12
SHF-205ENST00000559566 PSMB3P49720 205 aa14.31□□□□□ -0.12
SHF-205ENST00000559566 APOC4P55056 127 aa14.31□□□□□ -0.12
SHF-205ENST00000559566 Q6ZRG5 221 aa14.31□□□□□ -0.12
SHF-205ENST00000559566 KIR2DL5AQ8N109 375 aa14.31□□□□□ -0.12
SHF-205ENST00000559566 KIR2DL5BQ8NHK3 375 aa14.31□□□□□ -0.12
SHF-205ENST00000559566 GPR82Q96P67 336 aa14.31□□□□□ -0.12
SHF-205ENST00000559566 OVOL2Q9BRP0 275 aa14.31□□□□□ -0.12
SHF-205ENST00000559566 ELOA3CA0A087WX78 387 aaPredicted RBP14.3□□□□□ -0.12
SHF-205ENST00000559566 SMLR1H3BR10 107 aa14.3□□□□□ -0.12
SHF-205ENST00000559566 GIG44P09565 113 aaPredicted RBP14.3□□□□□ -0.12
SHF-205ENST00000559566 RPL7P18124 248 aaKnown RBP14.3□□□□□ -0.12
SHF-205ENST00000559566 HLA-DMBP28068 263 aa14.3□□□□□ -0.12
SHF-205ENST00000559566 SNRPD3P62318 126 aaKnown RBP14.3□□□□□ -0.12
SHF-205ENST00000559566 DEFB135Q30KP9 77 aa14.3□□□□□ -0.12
SHF-205ENST00000559566 SPATA31B1PQ5VZV4 182 aa14.3□□□□□ -0.12
SHF-205ENST00000559566 STHQ8IWL8 128 aa14.3□□□□□ -0.12
SHF-205ENST00000559566 OR2T35Q8NGX2 323 aa14.3□□□□□ -0.12
SHF-205ENST00000559566 ASB13Q8WXK3 278 aa14.3□□□□□ -0.12
SHF-205ENST00000559566 AQP10Q96PS8 301 aa14.3□□□□□ -0.12
SHF-205ENST00000559566 A0A087X0K7 114 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 RNF222A6NCQ9 220 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 F6UB75 175 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 H3BTX0 84 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 ISLRO14498 428 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 PRB4P10163 310 aaPredicted RBP14.29□□□□□ -0.12
SHF-205ENST00000559566 S100A7P31151 101 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 FGL1Q08830 312 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 OR1L4Q8NGR5 311 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 C16orf92Q96LL3 132 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 CSTL1Q9H114 145 aa14.29□□□□□ -0.12
SHF-205ENST00000559566 FXYD6-FXYD2A0A087WZ82 144 aa14.28□□□□□ -0.12
SHF-205ENST00000559566 H3BMM0 161 aa14.28□□□□□ -0.12
SHF-205ENST00000559566 ATF4P18848 351 aaPredicted RBP14.28□□□□□ -0.12
SHF-205ENST00000559566 C4BPBP20851 252 aa14.28□□□□□ -0.12
SHF-205ENST00000559566 NBEAL2Q6ZNJ1 2754 aa14.28□□□□□ -0.12
SHF-205ENST00000559566 RNF182Q8N6D2 247 aa14.28□□□□□ -0.12
SHF-205ENST00000559566 WWC2-AS2Q96NR7 200 aa14.28□□□□□ -0.12
SHF-205ENST00000559566 EDA2RQ9HAV5 297 aa14.28□□□□□ -0.12
SHF-205ENST00000559566 DNAH7Q8WXX0 4024 aa14.27□□□□□ -0.12
SHF-205ENST00000559566 H3BQ15 152 aa14.27□□□□□ -0.13
SHF-205ENST00000559566 UBE2CO00762 179 aa14.27□□□□□ -0.13
SHF-205ENST00000559566 ID1P41134 155 aa14.27□□□□□ -0.13
SHF-205ENST00000559566 MEOX2P50222 304 aa14.27□□□□□ -0.13
SHF-205ENST00000559566 Q6ZWC4 215 aa14.27□□□□□ -0.13
SHF-205ENST00000559566 PFDN5Q99471 154 aa14.27□□□□□ -0.13
SHF-205ENST00000559566 TNFSF18Q9UNG2 199 aa14.27□□□□□ -0.13
SHF-205ENST00000559566 SLC17A3O00476 420 aa14.26□□□□□ -0.13
SHF-205ENST00000559566 CA1P00915 261 aaPredicted RBP14.26□□□□□ -0.13
SHF-205ENST00000559566 IFNA5P01569 189 aa14.26□□□□□ -0.13
SHF-205ENST00000559566 IGLC2P0DOY2 106 aa14.26□□□□□ -0.13
SHF-205ENST00000559566 HLA-DRB4P13762 266 aa14.26□□□□□ -0.13
SHF-205ENST00000559566 MIR17HGQ75NE6 70 aa14.26□□□□□ -0.13
SHF-205ENST00000559566 S100A7AQ86SG5 101 aa14.26□□□□□ -0.13
SHF-205ENST00000559566 GATAD1Q8WUU5 269 aa14.26□□□□□ -0.13
SHF-205ENST00000559566 RNF183Q96D59 192 aa14.26□□□□□ -0.13
SHF-205ENST00000559566 PARD6GQ9BYG4 376 aaPredicted RBP14.26□□□□□ -0.13
SHF-205ENST00000559566 SAV1Q9H4B6 383 aaPredicted RBP14.26□□□□□ -0.13
SHF-205ENST00000559566 HLA-DRB4X5D2U9 266 aa14.26□□□□□ -0.13
SHF-205ENST00000559566 SPRY2O43597 315 aa14.25□□□□□ -0.13
SHF-205ENST00000559566 BPIFA4PQ86YQ2 179 aa14.25□□□□□ -0.13
SHF-205ENST00000559566 ZNF709Q8N972 641 aa14.25□□□□□ -0.13
SHF-205ENST00000559566 AGRNO00468 2067 aa14.24□□□□□ -0.13
SHF-205ENST00000559566 EIF3GO75821 320 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHF-205ENST00000559566 IGKV3-20P01619 116 aa14.24□□□□□ -0.13
SHF-205ENST00000559566 FAM78BQ5VT40 261 aa14.24□□□□□ -0.13
SHF-205ENST00000559566 FOXI2Q6ZQN5 318 aa14.24□□□□□ -0.13
SHF-205ENST00000559566 SCGB1C1Q8TD33 95 aa14.24□□□□□ -0.13
SHF-205ENST00000559566 FAM167A-AS1Q96KT0 104 aa14.24□□□□□ -0.13
SHF-205ENST00000559566 SLC25A2Q9BXI2 301 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms