RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SLC25A6P12236 298 aa9.24□□□□□ -0.93
TPM1-220ENST00000559556 GGNBP1Q5YKI7 109 aa9.24□□□□□ -0.93
TPM1-220ENST00000559556 OR4D5Q8NGN0 318 aa9.24□□□□□ -0.93
TPM1-220ENST00000559556 MCUBQ9NWR8 336 aa9.24□□□□□ -0.93
TPM1-220ENST00000559556 V9GYH0 126 aa9.24□□□□□ -0.93
TPM1-220ENST00000559556 ZNF98A6NK75 572 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 LYRM9A8MSI8 78 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 IAPPP10997 89 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 LRTM2Q8N967 370 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 OR11H7Q8NGC8 314 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 GPR82Q96P67 336 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 TMEM208Q9BTX3 173 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 KRTAP4-5Q9BYR2 181 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 SRRQ9GZT4 340 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 SLC25A22Q9H936 323 aa9.23□□□□□ -0.93
TPM1-220ENST00000559556 CRXO43186 299 aaPredicted RBP9.22□□□□□ -0.93
TPM1-220ENST00000559556 INSP01308 110 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 TSPOP30536 169 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 INPP1P49441 399 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 CNN1P51911 297 aaKnown RBP9.22□□□□□ -0.93
TPM1-220ENST00000559556 AP3S2P59780 193 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 TMEM128Q5BJH2 165 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 TRIQKQ629K1 86 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 OR1B1Q8NGR6 318 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 DEDD2Q8WXF8 326 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 CIB3Q96Q77 187 aaPredicted RBP9.22□□□□□ -0.93
TPM1-220ENST00000559556 RSG1Q9BU20 258 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 TMED3Q9Y3Q3 217 aa9.22□□□□□ -0.93
TPM1-220ENST00000559556 M0R2Z0 102 aa9.21□□□□□ -0.94
TPM1-220ENST00000559556 MED6O75586 246 aa9.21□□□□□ -0.94
TPM1-220ENST00000559556 DUSP14O95147 198 aaKnown RBP9.21□□□□□ -0.94
TPM1-220ENST00000559556 B2MP61769 119 aa9.21□□□□□ -0.94
TPM1-220ENST00000559556 SPINK13Q1W4C9 94 aa9.21□□□□□ -0.94
TPM1-220ENST00000559556 BPIFCQ8NFQ6 507 aa9.21□□□□□ -0.94
TPM1-220ENST00000559556 PLAC8L1A1L4L8 177 aa9.2□□□□□ -0.94
TPM1-220ENST00000559556 ZNF705GA8MUZ8 300 aaPredicted RBP9.2□□□□□ -0.94
TPM1-220ENST00000559556 SYNGR2O43760 224 aa9.2□□□□□ -0.94
TPM1-220ENST00000559556 UPK1BO75841 260 aa9.2□□□□□ -0.94
TPM1-220ENST00000559556 FAUP35544 74 aaKnown RBP9.2□□□□□ -0.94
TPM1-220ENST00000559556 ATG101Q9BSB4 218 aa9.2□□□□□ -0.94
TPM1-220ENST00000559556 PAIP2BQ9ULR5 123 aaKnown RBP9.2□□□□□ -0.94
TPM1-220ENST00000559556 TRAV8-2A0A0B4J237 113 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 NBDYA0A0U1RRE5 68 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 CENPXA8MT69 81 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 H3BRN7 92 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 CDK2AP2O75956 126 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 PRM2P04554 102 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 ORM2P19652 201 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 GATA2P23769 480 aaPredicted RBP9.19□□□□□ -0.94
TPM1-220ENST00000559556 S100A7P31151 101 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 DEFA1P59665 94 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 DEFA3P59666 94 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 RPP30P78346 268 aaKnown RBP9.19□□□□□ -0.94
TPM1-220ENST00000559556 TNP2Q05952 138 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 TMEM182Q6ZP80 229 aaPredicted RBP9.19□□□□□ -0.94
TPM1-220ENST00000559556 TMED4Q7Z7H5 227 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 BAP18Q8IXM2 172 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 RNF182Q8N6D2 247 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 ZNRF2Q8NHG8 242 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 TRIM63Q969Q1 353 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 TMEM147Q9BVK8 224 aa9.19□□□□□ -0.94
TPM1-220ENST00000559556 BOLA2-SMG1P6H3BVE0 249 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 WRBO00258 174 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 IL7P13232 177 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 VAMP1P23763 118 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 AKR1C1Q04828 323 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 BAK1Q16611 211 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 IGFL4Q6B9Z1 124 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 ACOT7LQ6ZUV0 252 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 TMEM256Q8N2U0 113 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 TOMM5Q8N4H5 51 aa9.18□□□□□ -0.94
TPM1-220ENST00000559556 SDHCQ99643 169 aaPredicted RBP9.18□□□□□ -0.94
TPM1-220ENST00000559556 DMBT1Q9UGM3 2413 aaPredicted RBP9.17□□□□□ -0.94
TPM1-220ENST00000559556 NAP1L6A6NFF2 107 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 C16orf90A8MZG2 172 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 H3BP45 60 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 ATP5G1P05496 136 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 DEFB130BP0DP73 79 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 DEFB130AP0DP74 79 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 AZU1P20160 251 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 ATP5G3P48201 142 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 MZT2BQ6NZ67 158 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 TMEM144Q7Z5S9 345 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 C6orf223Q8N319 242 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 ZNF738Q8NE65 137 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 SHANK2-AS3Q9BTD1 123 aa9.17□□□□□ -0.94
TPM1-220ENST00000559556 SLC25A39Q9BZJ4 359 aaPredicted RBP9.17□□□□□ -0.94
TPM1-220ENST00000559556 TRAV12-2A0A075B6T6 113 aa9.16□□□□□ -0.94
TPM1-220ENST00000559556 A0A087X0K7 114 aa9.16□□□□□ -0.94
TPM1-220ENST00000559556 F5H768 121 aa9.16□□□□□ -0.94
TPM1-220ENST00000559556 RPL7P18124 248 aaKnown RBP9.16□□□□□ -0.94
TPM1-220ENST00000559556 PLP1P60201 277 aa9.16□□□□□ -0.94
TPM1-220ENST00000559556 PPP1R1AQ13522 171 aa9.16□□□□□ -0.94
TPM1-220ENST00000559556 SPANXN5Q5MJ07 72 aa9.16□□□□□ -0.94
TPM1-220ENST00000559556 CYP2G1PQ6ZSU1 146 aa9.16□□□□□ -0.94
TPM1-220ENST00000559556 C16orf74Q96GX8 76 aa9.16□□□□□ -0.94
TPM1-220ENST00000559556 SLC25A21Q9BQT8 299 aaPredicted RBP9.16□□□□□ -0.94
TPM1-220ENST00000559556 HIGD1AQ9Y241 93 aa9.16□□□□□ -0.94
TPM1-220ENST00000559556 STRAPQ9Y3F4 350 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms