RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 RAB31Q13636 194 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 GDF5OSQ5U4N7 250 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 FOXI2Q6ZQN5 318 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 NRARPQ7Z6K4 114 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 SHANK2-AS3Q9BTD1 123 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 GGACTQ9BVM4 153 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 SLC25A39Q9BZJ4 359 aaPredicted RBP5.97□□□□□ -1.45
SNX1-207ENST00000559401 MFFQ9GZY8 342 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 ARV1Q9H2C2 271 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 C11orf68Q9H3H3 251 aaKnown RBP5.97□□□□□ -1.45
SNX1-207ENST00000559401 SAV1Q9H4B6 383 aaPredicted RBP5.97□□□□□ -1.45
SNX1-207ENST00000559401 KLK5Q9Y337 293 aaPredicted RBP5.97□□□□□ -1.45
SNX1-207ENST00000559401 IGHV3OR16-12A0A075B7B8 117 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 UBE2L5PA0A1B0GUS4 154 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 F6UB75 175 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 AGPAT2O15120 278 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 PRAF2O60831 178 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 DEDDO75618 318 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 GIG44P09565 113 aaPredicted RBP5.96□□□□□ -1.46
SNX1-207ENST00000559401 MIFP14174 115 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 RPL7P18124 248 aaKnown RBP5.96□□□□□ -1.46
SNX1-207ENST00000559401 CAMLGP49069 296 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 SULT1A1P50225 295 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 HBG1P69891 147 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 HBG2P69892 147 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 IFITM3Q01628 133 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 BAXQ07812 192 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 LRRC37A5PQ49AS3 106 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 IGFL4Q6B9Z1 124 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 CEMP1Q6PRD7 247 aaPredicted RBP5.96□□□□□ -1.46
SNX1-207ENST00000559401 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 PHLDA1Q8WV24 401 aaPredicted RBP5.96□□□□□ -1.46
SNX1-207ENST00000559401 UQCC1Q9NVA1 299 aa5.96□□□□□ -1.46
SNX1-207ENST00000559401 IGSF23A1L1A6 192 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 SSNA1O43805 119 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 LY6G6CO95867 125 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 RLN2P04090 185 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 PLP1P60201 277 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 PXDC1Q5TGL8 231 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 FAM78BQ5VT40 261 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 C10orf113Q5VZT2 155 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 SPATA31B1PQ5VZV4 182 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 LINC00305Q7Z4B0 112 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 RNF182Q8N6D2 247 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 Q8NAQ8 132 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 ZNF738Q8NE65 137 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 C20orf173Q96LM9 149 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 MGST2Q99735 147 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 SLC35B3Q9H1N7 401 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 LYRM2Q9NU23 88 aaPredicted RBP5.95□□□□□ -1.46
SNX1-207ENST00000559401 RNF24Q9Y225 148 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 X6R8D5 127 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 DNAH7Q8WXX0 4024 aa5.95□□□□□ -1.46
SNX1-207ENST00000559401 A0A0J9YX75 114 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 ZNF705EA8MWA4 302 aaPredicted RBP5.94□□□□□ -1.46
SNX1-207ENST00000559401 SNRPCP09234 159 aaKnown RBP5.94□□□□□ -1.46
SNX1-207ENST00000559401 ZNF705DP0CH99 300 aaPredicted RBP5.94□□□□□ -1.46
SNX1-207ENST00000559401 ZNF705BP0CI00 300 aaPredicted RBP5.94□□□□□ -1.46
SNX1-207ENST00000559401 RBMY1A1P0DJD3 496 aaKnown RBP5.94□□□□□ -1.46
SNX1-207ENST00000559401 RBMY1CP0DJD4 496 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 FGF7P21781 194 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 S100A11P31949 105 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 PSG9Q00887 426 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 RBMY1FQ15415 496 aaKnown RBP5.94□□□□□ -1.46
SNX1-207ENST00000559401 MIC13Q5XKP0 118 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 PATE2Q6UY27 113 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 Q6ZRG5 221 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 TMEM252Q8N6L7 170 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 CSNK1G2-AS1Q8NCQ2 148 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 OR1L4Q8NGR5 311 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 TMEM208Q9BTX3 173 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 C11orf1Q9H5F2 150 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 PPP1R14DQ9NXH3 145 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 WDR83OSQ9Y284 106 aa5.94□□□□□ -1.46
SNX1-207ENST00000559401 CSMD3Q7Z407 3707 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 STARD9Q9P2P6 4700 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 ELOA3CA0A087WX78 387 aaPredicted RBP5.93□□□□□ -1.46
SNX1-207ENST00000559401 TRAV8-2A0A0B4J237 113 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 E5RGE8 158 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 H3BTX0 84 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 DUSP14O95147 198 aaKnown RBP5.93□□□□□ -1.46
SNX1-207ENST00000559401 PRB4P10163 310 aaPredicted RBP5.93□□□□□ -1.46
SNX1-207ENST00000559401 HLA-DMBP28068 263 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 CNN1P51911 297 aaKnown RBP5.93□□□□□ -1.46
SNX1-207ENST00000559401 EMP1P54849 157 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 B2MP61769 119 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 RHOBP62745 196 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 CYCSP99999 105 aaKnown RBP5.93□□□□□ -1.46
SNX1-207ENST00000559401 HIST1H1AQ02539 215 aaPredicted RBP5.93□□□□□ -1.46
SNX1-207ENST00000559401 IL15RAQ13261 267 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 ATP6V1FQ16864 119 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 BPIFA4PQ86YQ2 179 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 LINC00476Q8WZB0 136 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 MARVELD1Q9BSK0 173 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 NMES1Q9C002 83 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 SLC25A31Q9H0C2 315 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 OR5AC2Q9NZP5 309 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 GOLT1BQ9Y3E0 138 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 RYR3Q15413 4870 aa5.93□□□□□ -1.46
SNX1-207ENST00000559401 A0A087X0K7 114 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms